https://pyvideo.org/2019-07-10T00:00:00+00:002019-07-10T00:00:00+00:002019-07-10T00:00:00+00:00Emmanuelle Gouillarttag:pyvideo.org,2019-07-10:/europython-2019/image-processing-with-scikit-image-and-dash.html

<h3>Description</h3><div class="line-block"> <div class="line">Images are an ubiquitous form of data in various fields of science and</div> <div class="line">industry. Images often need to be transformed and processed, for example for helping medical diagnosis by extracting regions of interest or measures, or for building training sets for machine learning.</div> </div> <div class="line-block"> <div class="line">In this talk, I will present …</div></div>

<h3>Description</h3><div class="line-block"> <div class="line">Images are an ubiquitous form of data in various fields of science and</div> <div class="line">industry. Images often need to be transformed and processed, for example for helping medical diagnosis by extracting regions of interest or measures, or for building training sets for machine learning.</div> </div> <div class="line-block"> <div class="line">In this talk, I will present and discuss several tools for automatic and</div> <div class="line">interactive image processing with Python. I will start by a short</div> <div class="line">introduction to scikit-image (<a class="reference external" href="https://scikit-image.org/">https://scikit-image.org/</a>), the open-source</div> <div class="line">image processing toolkit of the Pydata ecosystem, which aims at</div> <div class="line">processing images from a large class of modalities (2-D, 3-D, etc.) and</div> <div class="line">strives to have a gentle learning curve with pedagogical example-based</div> <div class="line">documentation. scikit-image provides users with a simple API based on a large number of functions, which can be used to build pipelines of image processing workflows.</div> </div> <div class="line-block"> <div class="line">In a second part, I will explain how to use Dash for building interactive</div> <div class="line">image processing operations. Dash (<a class="reference external" href="https://dash.plot.ly/">https://dash.plot.ly/</a>) is an</div> <div class="line">open-source Python web application framework developed by Plotly. Written on top of Flask, Plotly.js, and React.js, Dash is meant for building data visualization apps with highly custom user interfaces in pure Python. The dash-canvas component library of Dash (<a class="reference external" href="https://dash.plot.ly/canvas">https://dash.plot.ly/canvas</a>) is an interactive component for annotating images with several tools (freehand brush, lines, bounding boxes, ...). It also provides utility functions for using user-provided annotations for several image processing tasks such as segmentation, transformation, measures, etc. The latter functions are based on libraries such scikit-image and openCV. A gallery of examples showcases some typical uses of Dash for image processing on</div> <div class="line"><a class="reference external" href="https://dash-canvas.plotly.host/">https://dash-canvas.plotly.host/</a>. Also, other components of Dash can be leveraged easily to build powerful image processing applications, such as widgets to tune parameters or data tables for inspecting object</div> <div class="line">properties.</div> </div>