Package: BiocBaseUtils 1.13.0

Marcel Ramos

BiocBaseUtils: General utility functions for developing Bioconductor packages

The package provides utility functions related to package development. These include functions that replace slots, and selectors for show methods. It aims to coalesce the various helper functions often re-used throughout the Bioconductor ecosystem.

Authors:Marcel Ramos [aut, cre], Martin Morgan [ctb], Hervé Pagès [ctb]

BiocBaseUtils_1.13.0.tar.gz
BiocBaseUtils_1.13.0.zip(r-4.6)BiocBaseUtils_1.13.0.zip(r-4.5)BiocBaseUtils_1.13.0.zip(r-4.4)
BiocBaseUtils_1.13.0.tgz(r-4.6-any)BiocBaseUtils_1.13.0.tgz(r-4.5-any)
BiocBaseUtils_1.13.0.tar.gz(r-4.6-any)BiocBaseUtils_1.13.0.tar.gz(r-4.5-any)
BiocBaseUtils_1.13.0.tgz(r-4.5-emscripten)
BiocBaseUtils.pdf |BiocBaseUtils.html✨
BiocBaseUtils/json (API)
NEWS

# Install 'BiocBaseUtils' in R:

install.packages('BiocBaseUtils', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/biocbaseutils/issues

On BioConductor:BiocBaseUtils-1.13.0(bioc 3.23)BiocBaseUtils-1.12.0(bioc 3.22)

software infrastructure bioconductor-package core-package

8.89 score 4 stars 294 packages 3 scripts 11k downloads 12 exports 0 dependencies

Last updated from:d510c94ac1. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.

Target	Result	Total time
bioc-checks	WARNING	120
linux-devel-x86_64	NOTE	166
source / vignettes	OK	186
linux-release-x86_64	NOTE	146
macos-devel-arm64	NOTE	75
macos-release-arm64	NOTE	78
windows-devel	NOTE	60
windows-release	NOTE	63
windows-oldrel	NOTE	69
wasm-release	OK	96

Exports:askUserYesNo checkInstalled isCharacter isScalarCharacter isScalarInteger isScalarLogical isScalarNumber isTRUEorFALSE isZeroOneCharacter lifeCycle selectSome setSlots

Dependencies:

BiocBaseUtils Quick Start

Bioconductor Core Team

Rendered fromBiocBaseUtils.Rmdusingknitr::rmarkdownon Feb 21 2026.

Last update: 2022-08-18
Started: 2022-08-18

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
BiocBaseUtils: Utility and Internal functions for Bioconductor packages	BiocBaseUtils-package BiocBaseUtils
Ask user for a yes/no response	askUserYesNo
Suite of helper functions to test for types	Assertions isCharacter isScalarCharacter isScalarInteger isScalarLogical isScalarNumber isTRUEorFALSE isZeroOneCharacter
Check packages are installed otherwise suggest	checkInstalled
Set the life cycle stage of a function	lifeCycle
Select and return only some entries from a vector	selectSome
Convenience function to set slot values	replaceSlots setSlots