Package: MGFM 1.45.0
Khadija El Amrani
MGFM: Marker Gene Finder in Microarray gene expression data
The package is designed to detect marker genes from Microarray gene expression data sets
Authors:
MGFM_1.45.0.tar.gz
MGFM_1.45.0.zip(r-4.6)MGFM_1.45.0.zip(r-4.5)MGFM_1.45.0.zip(r-4.4)
MGFM_1.45.0.tgz(r-4.6-any)MGFM_1.45.0.tgz(r-4.5-any)
MGFM_1.45.0.tar.gz(r-4.6-any)MGFM_1.45.0.tar.gz(r-4.5-any)
MGFM_1.45.0.tgz(r-4.5-emscripten)
MGFM.pdf |MGFM.html✨
MGFM/json (API)
NEWS
| # Install 'MGFM' in R: |
| install.packages('MGFM', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- ds2.mat - Microarray gene expression data set
On BioConductor:MGFM-1.45.0(bioc 3.23)MGFM-1.44.0(bioc 3.22)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
geneticsgeneexpressionmicroarray
Last updated from:86143b08f3. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Total time | Artifact |
|---|---|---|---|
| bioc-checks | ERROR | 167 | |
| linux-devel-x86_64 | NOTE | 212 | |
| source / vignettes | OK | 235 | |
| linux-release-x86_64 | NOTE | 222 | |
| macos-devel-arm64 | NOTE | 135 | |
| macos-release-arm64 | NOTE | 167 | |
| windows-devel | NOTE | 166 | |
| windows-release | NOTE | 167 | |
| windows-oldrel | NOTE | 160 | |
| wasm-release | OK | 130 |
Exports:getHtmlpagegetMarkerGenes
Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgenericsgluehttrIRangesjsonliteKEGGRESTlifecyclememoisemimeopensslpkgconfigpngR6rlangRSQLiteS4VectorsSeqinfosysvctrsXMLxtableXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Marker Gene Finder in Microarray gene expression data | MGFM-package MGFM |
| Microarray gene expression data set | ds2.mat |
| Function to build HTML pages to show marker genes | getHtmlpage |
| Marker Gene Detection | getMarkerGenes |
