SBGrid Access and Support Documentation
Introduction
SBGrid provides a curated collection of software tools commonly used in structural biology, including CryoEM, CryoET, crystallography, and related computational workflows. Much of the software in the SBGrid collection is open source or free for academic use. We also support many titles that require licensing for academic and industry use. If you are not familiar with SBGrid, you may be interested in how SBGrid works, the list of supported software titles, reporting bugs and requesting new software or software tutorials on our YouTube channel.
Key Features
- Easily install scientific software packages with minimal user intervention.
- Automatically handle dependencies to ensure all required libraries and tools are installed.
- Manage multiple versions of software packages, switching between versions as needed.
- Keep software packages up-to-date with the latest releases and patches.
- Compatible with various operating systems, including Linux and macOS.
Join our community to get access to over 500 structural biology applications, curated and supported by our team.
Getting Started for End Users and Administrators
- Using SBGrid on your computer - for users who have already installed SBGrid
- Installing SBGrid Software - for users who have not installed SBGrid
- Reporting Software Bugs and Requesting new Titles/Updates
- Resources For Structural Biology Software Training
Advanced Instructions for End Users
- Additional Instructions for Selected Software Titles
- Selecting Particular Software Versions
- Fine-tuning SBGrid Environment (Capsules + sbinfo + sbgrid-info)
- Using SBGrid with remote graphics
- HPC without
/programslink /Apptainer
FAQ for End User
- PHENIX/Coot GUI Integration isn't working, is this an issue with my installation?
- Do I need to install the NVIDIA CUDA toolkit?
- Issues after upgrading Macs
- Will this work on other Linux distributions?
- Will this work on Windows?
- Hardware and Operating System Requirements
Advanced Installation Instructions
- MacOS/Linux GUI installer Instructions
- MacOS/Linux Command Line Installer Instructions
- AWS Installation
- Windows Installations
- Installation Troubleshooting
- Site Administrator Tools
- Account Migration
Need immediate help? Check our troubleshooting guide or contact support.
SBGrid Consortium is located at Harvard Medical School in Boston, Massachusetts.