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A tool for drug repurposing and drug discovery with graph (network) analysis using Tiger Graph Database

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Dervish

Contributers and Contact Information: Yusuf Sait Canbaz

Problem Statement addressed (or explain your own): 4. Find Novel Drug Treatments

Description: Dervish is deployed in github-pages, You can try it from https://canbax.github.io/dervish/.

We want to combine topological properties of the graph and data attributes to make in depth interpretations of data. We also want to provide a user-friendly tool with visualizing graph effectively. You can check 3 minutes video for more information https://www.youtube.com/watch?v=mJBYM38lhiI

Many features in our tool is schema-agnostic and generic. So any TigerGraph solution can reuse them easily.

Dependencies

Only dependency is a TigerGraph solution. You can connect your solution to by providing its credential info Dervish

Installation

If you want to create your own data, go to https://github.com/canbax/derman and execute Jupyter notebook one by one.

Other than that Dervish uses some installed GSQL queries. All those queries needs to be installed in TigerGraph solution. Source codes of the queries are https://github.com/canbax/dervish/tree/main/src/assets/gsql

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A tool for drug repurposing and drug discovery with graph (network) analysis using Tiger Graph Database

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