Package: ArrayExpress 1.71.0

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Jose Marugan

ArrayExpress: Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet.

Authors:Audrey Kauffmann, Ibrahim Emam, Michael Schubert, Jose Marugan

ArrayExpress_1.71.0.tar.gz
ArrayExpress_1.71.0.zip(r-4.6)ArrayExpress_1.71.0.zip(r-4.5)ArrayExpress_1.71.0.zip(r-4.4)
ArrayExpress_1.71.0.tgz(r-4.5-any)
ArrayExpress_1.71.0.tar.gz(r-4.6-any)ArrayExpress_1.71.0.tar.gz(r-4.5-any)
ArrayExpress_1.71.0.tgz(r-4.5-emscripten)
ArrayExpress.pdf |ArrayExpress.html
ArrayExpress/json (API)
NEWS

# Install 'ArrayExpress' in R:
install.packages('ArrayExpress', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:ArrayExpress-1.71.0(bioc 3.23)ArrayExpress-1.70.0(bioc 3.22)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarraydataimportonechanneltwochannel

6.09 score 1 packages 137 scripts 862 downloads 2.0k mentions 8 exports 55 dependencies

Last updated from:4a2515936a. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTotal timeArtifact
bioc-checksERROR157
linux-devel-x86_64OK361
source / vignettesOK382
linux-release-x86_64OK400
macos-release-arm64OK289
macos-oldrel-arm64OK366
windows-develOK330
windows-releaseOK334
windows-oldrelOK347
wasm-releaseOK121

Exports:ae2biocArrayExpressextract.zipgetAEgetcolprocgetcolrawprocsetqueryAE

Dependencies:abindaffxparseraffyioaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemclicodetoolscpp11crayoncurlDBIDelayedArrayfastmapffforeachgenericsGenomicRangesgluehttrIRangesiteratorsjsonlitelatticelifecyclelimmaMatrixMatrixGenericsmatrixStatsmemoisemimeoligooligoClassesopensslpkgconfigplogrpreprocessCoreR6rlangRSQLiteS4ArraysS4VectorsSeqinfoSparseArraystatmodSummarizedExperimentsysvctrsXVector

ArrayExpress: Import and convert ArrayExpress data sets into R object

Rendered fromArrayExpress.Rnwusingutils::Sweaveon Nov 23 2025.

Last update: 2023-03-16
Started: 2013-11-01

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