Package: sampleClassifier 1.33.0

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Khadija El Amrani

sampleClassifier: Sample Classifier

The package is designed to classify microarray RNA-seq gene expression profiles.

Authors:Khadija El Amrani [aut, cre]

sampleClassifier_1.33.0.tar.gz
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sampleClassifier.pdf |sampleClassifier.html✨
sampleClassifier/json (API)
NEWS

# Install 'sampleClassifier' in R:
install.packages('sampleClassifier', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:sampleClassifier-1.35.0(bioc 3.23)sampleClassifier-1.33.0(bioc 3.22)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologyclassificationmicroarrayrnaseqgeneexpression

3.00 score 295 downloads 5 exports 75 dependencies

Last updated from:993e1fd601. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTotal timeArtifact
bioc-checksERROR220
linux-devel-x86_64OK334
source / vignettesOK386
linux-release-x86_64OK348
macos-devel-arm64OK350
macos-release-arm64OK217
windows-develOK320
windows-releaseOK334
windows-oldrelOK358
wasm-releaseOK185

Exports:classifyProfileclassifyProfile.rnaseqclassifyProfile.rnaseq.svmclassifyProfile.svmget.heatmap

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocFileCacheBiocGenericsbiomaRtBiostringsbitbit64blobcachemclassclicpp11crayoncurlDBIdbplyrdplyre1071farverfastmapfilelockgenericsggplot2gluegtablehmshttrhttr2IRangesisobandjsonliteKEGGRESTlabelinglifecyclemagrittrMASSmemoiseMGFMMGFRmimeopensslpillarpkgconfigplogrpngprettyunitsprogressproxypurrrR6rappdirsRColorBrewerrlangRSQLiteS4VectorsS7scalesSeqinfostringistringrsystibbletidyrtidyselectutf8vctrsviridisLitewithrXMLxml2xtableXVector

sampleClassifier Vignette

Rendered fromsampleClassifier.Rnwusingutils::Sweaveon Dec 18 2025.

Last update: 2018-08-30
Started: 2017-01-24

Readme and manuals

Help Manual

Help pageTopics
Sample ClassifiersampleClassifier-package sampleClassifier
Expression profile classificationclassifyProfile
Expression profile classificationclassifyProfile.rnaseq
Expression profile classificationclassifyProfile.rnaseq.svm
Expression profile classificationclassifyProfile.svm
display classification results as heatmapget.heatmap
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