Skip to content

jtleek/data

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

2 Commits
 
 

Repository files navigation

Curated Data Sets

  • tidypvals - data from over 2.5 million published p-values compiled by Jeff Leek.
  • recount2 - large collection of RNA-seq data created by Leo Collado Torres, Ben Langmead, and Abhi Nellore.
  • Recount a database of free RNA-seq data sets at the gene count level created by Alyssa Frazee
  • Medical Journal P-value Data - a set of p-values scraped from the abstracts of the New England Journal of Medicine, JAMA, BMJ, The Lancet, and the Amerian Journal of Epidemiology from 2000-2010 created by Jeff Leek.
  • Processed GEUVADIS data - processed data from 667 RNA-seq samples from the GEUVADIS project created by Alyssa Frazee.
  • GEUVADIS BAM files - processed with Tophat2 and created by Alyssa Frazee
  • anitProfiles data - gene expression data from cancer and normal samples used in our paper on classifying with variance created by Hector Corrada Bravo.
  • Peer review data - data from our laboratory experiment of peer review created by Jeff Leek and Margaret Taub.
  • Batch effect data - data on batch effects from a range of genomic technologies created by Jeff Leek, Rafa Irizarry,Hector Corrada Bravo, Ben Langmead, Keith Baggerly, Evan Johnson, Rob Scharpf, and David Simcha.
  • Bladder batch data - data on batch effects from a study of bladder cancer in expression set format created by Jeff Leek
  • Braincloud - data from our paper looking at patterns of variation in gene expression in the human brain created by Carlo Colantuoni.

About

Data resources created by the Leek group

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published