QIIME 2 plugin for sequence alignment using minimap2.

QIIME 2 plugin for submission of metadata and raw sequence reads to ENA.

A Qiime plugin for MICOM.

genome-sampler: sample viral genomes across time of isolation, location of isolation, and genome divergence.

q2-boots: bootstrapped and rarefaction-based alpha and beta diversity analyses 🥾

QIIME 2 plugin for analysis of genomes using GUNC.

QIIME 2 plugin for functional annotation and taxonomic classification of shotgun metagenomes.