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Checklist towards Fixing Cron CI

Continuous Integration

dependenciesPull requests that update a dependency filePull requests that update a dependency file

installation

M1 Mac

Status: Open.

Task

#5295 In MDAnalysis/mdanalysis;

· jeremyleung521 opened on Mar 9, 2026

Remove RTD labelling action in favour of using the build preview directly from rtd

Status: Open.

#5287 In MDAnalysis/mdanalysis;

· IAlibay opened on Mar 7, 2026

[Documentation] Error when trying to build PDF documentation file

Status: Open.

#5281 In MDAnalysis/mdanalysis;

· DariuszKamil opened on Mar 6, 2026

Improve Azure CI performance by enabling pip dependency caching

Status: Open.

#5255 In MDAnalysis/mdanalysis;

· vinitjain2005 opened on Feb 27, 2026

Add accelerated backends support for minimize_vectors

Component-lib

performance

Status: Open.

Feature

#5234 In MDAnalysis/mdanalysis;

· PardhavMaradani opened on Feb 18, 2026

Add guards to index assignment in Universe creation

Component-Core

usability

Status: Open.

Feature

#5223 In MDAnalysis/mdanalysis;

· yuxuanzhuang opened on Feb 4, 2026

Incompatibility of StringIO objects with parallelization

Component-Readers

parallelization

Status: Open.

#5221 In MDAnalysis/mdanalysis;

· talagayev opened on Feb 3, 2026

Framework for Performance Benchmarking in Analysis

Component-Analysis

performance

Status: Open.

Feature

#5211 In MDAnalysis/mdanalysis;

· yuxuanzhuang opened on Jan 18, 2026

CI: Azure_Tests Win timeout occasionally

Continuous Integration

defect

Status: Open.

#5191 In MDAnalysis/mdanalysis;

· PardhavMaradani opened on Dec 29, 2025

Support per-frame analysis by AnalysisBase-based classes for streamed trajectories

Component-Analysis

enhancement

streaming

Status: Open.

Feature

#5183 In MDAnalysis/mdanalysis;

· PardhavMaradani opened on Dec 22, 2025

Add option for gemmi backend for PDB reading

Component-Readers

Format-PDB

Status: Open.

#5141 In MDAnalysis/mdanalysis;

· marinegor opened on Nov 6, 2025

Incorrect unwrapping for LAMMPS trajectories due to unused image flags for periodic boundary condition

format-LAMMPS

more information neededPlease reply to requests for information or the issue will be closed.Please reply to requests for information or the issue will be closed.

PBC

Status: Open.

#5138 In MDAnalysis/mdanalysis;

· gitsirsha opened on Oct 28, 2025