bump version, fix README, update cran-comments, update NEWS

Author: jmtaylor-fhcrc

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: DataSpaceR
 Type: Package
 Title: Interface to 'the CAVD DataSpace'
-Version: 0.7.6
+Version: 0.7.7
 Authors@R: c(person("Ju Yeong", "Kim", role = "aut"),
              person("Sean", "Hughes", role = "rev"),
              person("Jason", "Taylor", email = "[email protected]", role = c("aut", "cre")),

NEWS.md

@@ -1,3 +1,8 @@
+# DataSpaceR 0.7.7
+
+* Fixed issues querying mab and donor information.
+* Added workarounds for errors and warnings when trying to verify certs and querying the database with GROUP_CONCAT operations.
+
 # DataSpaceR 0.7.6
 
 * Add new feature adding LANL metadata to NAb mAb data pulls.

README.md

@@ -6,7 +6,7 @@
 <!-- badges: start -->
 [![R build
 status](https://github.com/ropensci/DataSpaceR/workflows/R-CMD-check/badge.svg)](https://github.com/ropensci/DataSpaceR/actions)
-[![codecov](https://codecov.io/gh/ropensci/DataSpaceR/branch/main/graph/badge.svg)](https://codecov.io/gh/ropensci/DataSpaceR/branch/main)
+[![codecov](https://app.codecov.io/gh/ropensci/DataSpaceR/branch/main/graph/badge.svg)](https://app.codecov.io/gh/ropensci/DataSpaceR/branch/main)
 [![CRAN
 Status](https://www.r-pkg.org/badges/version/DataSpaceR)](https://cran.r-project.org/package=DataSpaceR)
 [![Project Status: Active – The project has reached a stable, usable

cran-comments.md

@@ -1,44 +1,16 @@
 ## Release summary
 
-* This is a new release.
-* Two new package features added.
+* This is a patch to the existing release.
 
 ## Test environments
 
-* local R installation, R 4.1.1
-* ubuntu 18.04 and macOS (on GitHub Actions), R 4.1.1
-* win-builder (devel)
+* local R installation, R 4.4.2
+* OS: ubuntu 24.04.01, macOS 14.7.2, Windows Server 2022, R : release, devel, 4.0.4
 
 ## `R CMD check` results
 
-0 errors | 0 warning | 0 notes
+Status: OK
 
 ## `devtools::check()` results
 
-0 errors | 1 warning | 0 notes
-
-❯ checking for unstated dependencies in examples ... OK
-   WARNING
-  ‘qpdf’ is needed for checks on size reduction of PDFs
-
-## `devtools::check_win_devel()` results
-
-These are valid URLs:
-
-```
-Found the following (possibly) invalid URLs:
-  URL: https://dataspace.cavd.org
-    From: DESCRIPTION
-          inst/doc/DataSpaceR.html
-          README.md
-    Status: 401
-    Message: Unauthorized
-  URL: https://dataspace.cavd.org/
-    From: README.md
-    Status: 401
-    Message: Unauthorized
-  URL: https://dataspace.cavd.org/_webdav/static/%40files/documents/dataspacer_cheat_sheet.pdf
-    From: README.md
-    Status: 401
-    Message: Unauthorized
-```
+0 errors | 0 warning | 0 notes