| Vol-319 © 2007 for the individual papers by the papers' authors. Copying permitted for private and academic purposes. Re-publication of material from this volume requires permission by the copyright owners.

# LBM 2007 Short Papers
The 2nd International Symposium on Languages in Biology and Medicine

### Short Paper Proceedings of the 2nd International Symposium on Languages in Biology and Medicine (LBM 2007)

### Singapore, December 6-7, 2007.

Edited by

### Christopher J.O. Baker *, Su Jian *

* Data Mining Department, Institute for Infocomm Research, Singapore

## Table of Contents

Preface

1. Decentralised Clinical Guidelines Modelling with Lightweight Coordination Calculus (1.1-1.14)
   Bo Hu, Srinandan Dasmahapatra, Dave Robertson and Paul Lewis
2. Recognition of Multi-sentence n-ary Subcellular Localization Mentions in Biomedical Abstracts (2.1-2.17)
   Gabor Melli, Martin Ester and Anoop Sarkar
3. The Integration of Multiple Feature Representations for Protein Protein Interaction Classification Task (3.1-3.17)
   Man Lan and Chew Lim Tan
4. Analysis and Enhancement of Conditional Random Fields Gene Mention Taggers in BioCreative II Challenge Evaluation (4.1-4.14)
   Yu-Ming Chang, Cheng-Ju Kuo, Han-Shen Huang, Yu-Shi Lin and Chun-Nan Hsu
5. Classifier ensemble for biomedical document retrieval (5.1-5.17)
   Manabu Torii and Hongfang Liu
6. Syntactic features for protein-protein interaction extraction (6.1-6.14)
   Rune Sætre, Kenji Sagae and Jun'ichi Tsujii
7. Protein-protein interaction abstract identification with contextual bag of words (7.1-7.24)
   Richard Tzong-Han Tsai, Hsieh-Chuan Hung, Hong-Jie Dai and Yi-Wen Lin

submitted by Christopher J.O. Baker, 18-Jan-2008
published on CEUR-WS.org,18-Jan-2008
changed on 18-Jan-2008 by Christopher J.O Baker (corrected title of the proceedings and included one more as Edited authors)
changed on 25-Jan-2008 by Christopher J.O Baker (Paper 5 and 6 are updated with new version of tables and figure)