Field of Science

Showing posts with label books. Show all posts
Showing posts with label books. Show all posts

Books read in 2024

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I read 57 books this year, satisfying my annual goal of reading at least 50. Some are re-reads (starred) —I was on an Oliver Sacks binge last month. As usual, the list is skewed toward non-fiction (verity) with some excellent fiction: Hernan Diaz's "Trust," an endlessly inventive novel, was a keeper. And as usual, science and history dominate the list.

My top five favorites were “The Best Minds” (a riveting real-life tale of schizophrenia and murder), “Fire Weather” (a brilliantly written investigation of the confluence of oil and fire country in the the vast wilderness of Canada), Oliver Sacks’s “Letters”, “More than Curious” (a revealing account of physics personalities and ideas from one on the frontier) and “Material World” (an endlessly fascinating account of the origins, properties, and geopolitical implications of the critical materials that fuel our civilization).
Happy reading in 2025!

  1. Weapons of the Lewis and Clark Expedition - Jim Garry

  2. The Indispensables - Patrick O’Donnell

  3. From Falling Bombs to Radio Waves - Emilie Serge

  4. New Cold Wars - David Sanger

  5. The Fifties - David Halberstam

  6. For Blood and Money - Nathan Vardi

  7. Madame Curie - Eve Curie

  8. Physics in the Twentieth Century - Victor Weisskopf

  9. I’ve Been Thinking - Daniel Dennett

  10. Letters - Oliver Sacks

  11. Uncle Tungsten - Oliver Sacks*

  12. On the Move - Oliver Sacks*

  13. Awakenings - Oliver Sacks*

  14. A Leg to Stand On - Oliver Sacks

  15. Deadly Feasts - Richard Rhodes

  16. The Man With a Shattered World - A. R. Luria

  17. The Golden Road - William Dalrymple

  18. Campaigning with Grant - Horace Porter

  19. Poor Charlie’s Almanack - Charlie Munger*

  20. Origin Story: The Trials of Charles Darwin - Howard Markel

  21. Klan War: Ulysses S. Grant and the Battle to Save Reconstruction - Fergus Bordewich

  22. No Ordinary Time - Doris Kearsn Goodwin

  23. Playground - Richard Powers

  24. Life Atomic: A History of Radioisotopes in Science and Medicine - Angela Creager

  25. Areopagitica - John Milton

  26. The Uranium Club - Miriam Hiebert

  27. America’s Cold Warrior - James Wilson

  28. Project Hail Mary - Andy Weir

  29. Quanta and Fields - Sean Carroll

  30. The Peacemaker - William Inboden

  31. Reagan - Max Boot

  32. Why We Die - Venki Ramakrishnan

  33. Genius Talk - Denis Brian

  34. Trust - Hernan Diaz

  35. Waves in an Impossible Sea - Matt Strassler

  36. Material World - Ed Conway

  37. More than Curious - William Press

  38. American Spring - Walter Borneman

  39. Valley Forge - Bob Drury, Tom Clavin

  40. American Colonies - Alan Taylor

  41. Breaking the Spell - Daniel Dennett

  42. Strategies of Containment - John Lewis Gaddis

  43. Hinge Points - Siegfried Hecker

  44. Washington: The Indispensable Man - James Flexner

  45. The Best Minds - Jonathan Rosen

  46. Fire Weather - John Vaillant

  47. Inside the O’Briens - Lisa Genova

  48. The Revolutionary - Stacy Schiff

  49. Blind Spots - Marty Makary

  50. The Quiet Damage - Jesselyn Cook

  51. Foundation for the Future: The ABM Treaty and National Security - Arms Control Association

  52. The Japanese Empire: Grand Strategy from the Meiji Restoration to the Pacific War - S. C. M. Paine

  53. The Gravity of Math - Shing-Tung Yau and Steve Nadis

  54. In Retrospect: The Tragedy and Lessons of Vietnam - Robert McNamara*

  55. The Fog of War - Robert McNamara and Erroll Morris

  56. Because Our Fathers Lied - Craig McNamara

  57. Making Weapons, Talking Peace - Herbert York


In addition, there were textbooks that I browsed and worked through to various degrees; many of them are old favorites and are part of my continued education. The books included Alberts et al.'s "Molecular Biology of the Cell", Patrick's "Introduction to Medicinal Chemistry", Taylor and Wheeler's "Exploring Black Holes: Introduction to General Relativity", Feynman's "Lectures" (Volume 2), Glasstone's "Nuclear Reactor Engineering" and Penrose's "Road to Reality".

Daniel Dennett (1942-2024)

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For a long time there's been a kind of Cold War with a slow moving front between philosophers and scientists, especially physicists. The scientists accuse the philosophers of being as useful to the theory and practice of science as "ornithologists are to birds", as a popular saying goes. The philosophers in turn emphasize to the scientists that their disciplines, especially in the 20th and 21st centuries, are so complex and abstract that they cannot be understood without the input of philosophy.

It is in the light of this debate, especially, that the death of Daniel Dennett hit so hard. Unlike most philosophers, Dennett was someone who tried to seriously grapple with the actual facts of science - in his case, evolutionary biology and neuroscience - as opposed to the fevered armchair speculation of philosophy. These facts were on full display in the many phenomenal books he wrote, of which my favorites are "Darwin's Dangerous Idea", "Breaking the Spell" and "From Bacteria to Bach and Back".

Dennett's writing was wonderful and brilliant - extremely witty, confident, bold, even stridently so. He was one of only a handful of writers who regularly elicited moments of "Aha!" in my mind. More than almost anyone else from his generation he was unafraid of taking on bold ideas, particularly ones which would make readers uncomfortable. Whether he was arguing that consciousness is a kind of useful delusion in "Consciousness Explained" or exhorting readers to take the scientific study of religion seriously, as in "Breaking the Spell", Dennett was always provocative. I do not remember a single time when I did not come away from a piece of Dennett's writing without ideas and questions swirling around in my head.

This was true irrespective of whether I agreed with him or not, and there was certainly enough in his work for spirited disagreement. But this is something that needs to be pointed out especially today when so many of us are being asked, explicitly or implicitly, to pick sides, to eschew shades of gray, to personify the "with us or against us" ethos. Dennett took his opponents' arguments seriously, before politely demolishing them. Even when he mocked shoddy thinking - and there was no dearth of that kind of incisive analysis in his writings - he did so after careful consideration of their positions. That quality is on full display in "Breaking the Spell" in which he takes on religious proponents with zeal and certainly, but also with careful analysis.

It was Dennett's critical take on religion that led him to be pegged as one of the four "horsemen" of the New Atheism movement, along with Richard Dawkins, Christopher Hitchens and Sam Harris. Part of what made him a member of that group was his sheer delight at the wonders of natural (as opposed to supernatural) evolution by natural selection. In fact, one of the most delightful and brilliant things he wrote showcasing the centrality of a mindless but highly creative process giving the illusion of intelligence was the following from "From Bacteria to Bach and Back":

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I find that last sentence to be cleverness exemplified. But given his vast oeuvre of writings, I never thought membership in the brotherhood of the horsemen to be a particularly significant part of Dennett's intellectual identity, and from what I hear, neither did he. Instead it was just one among many facets of a life devoted to reason, understanding and debate. His books were packed with so many things apart from atheism that it would be a disservice to primarily identify him with that movement.

When I heard about Dennett's death I was about to spend some quality reading time in a coffee shop. I picked up "Breaking the Spell" and spent the next two hours engaging with that classic Dennettsian blend of provocativeness, wit and wisdom. At the end, just like when I had read his works before, I felt invigorated, as if I had just had a first-class workout in a mental gym. And as before I felt like a slight shift had taken place in my consciousness, my understanding of the world and myself. The core of Dan Dennett's identity was devoted to teaching us to question our deepest, most cherished beliefs and to encourage critical thinking, no matter where it led us. In the process he made us think and feel provoked, delighted and yes, uncomfortable. Because through discomfort, whether physical or mental, comes enlightenment.

Book Review: "Into Siberia: George Kennan's Epic Journey Through the Brutal, Frozen Heart of Russia", by Gregory Wallance

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It may seem hard to believe now, but in 1865, by the time the Civil War ended, Russia was America's best friend in Europe. The two countries enjoyed a healthy diplomatic relationship, buoyed by trade and a mutual distrust of Great Britain; Russia was the only European nation to support the Union during the war. America sent formal condolences when Tsar Alexander was assassinated; Russia did the same when Lincoln was shot.

By 1891 it was all over. American mistrust of Russia was so pronounced that all diplomatic relations had cooled. It has never been the same since. What changed? Many factors played a role, but a significant one was the publication in 1891 of a now forgotten book by the journalist, writer and explorer George Kennan. Titled "Siberia and the Exile System", it documented in vivid detail the brutal, cruel, unsparing system of Siberia exile, inflicted by Tsarist Russia on its people for the most trivial misdemeanors.

"Into Siberia" is the vivid account by Gregory Wallance of the Ohio-born and raised George Kennan's two visits to Russia, first in the 1860s as an employee of Western Union with the mammoth goal of laying a trans-Siberian telegraph line that would connect Europe to America, and then again as a journalist formally authorized by the Tsarist regime to document the exile system in Siberia. Ironically, the Russian monarchy and government thought that Kennan's coverage of the system would invoke sympathy in the rest of the world for its need; little did they know that they were letting a fox in the henhouse.

Wallance excels at two things in particular; firstly at describing the almost unbelievably stark and brutal Russian landscape, populated by neck-deep snow, fatal temperatures well below -40 degrees and fierce indigenous tribes who had hardly had any contact with their more modern countrymen, and second at describing Kennan's epic journey into this wasteland. He is also exceedingly good at charting the stunningly inhumane treatment of prisoners and their families at the hands of the Tsar and his officials; the book opens with an unforgettable description of a pillar at the border of Siberia at which men and women cried uncontrollably, because the journey past this pillar was almost certainly one from which they would not return.

It's hard to not be thoroughly inspired by Kennan, a sickly young man who, determined to prove that he was strong of body and character, undertook the almost impossibly dangerous and exotic journey in 1865 to Siberia. His letters home remind one of other brave explorers staying cheerful in the face of danger or death - Shackleton, Cherry-Garrard, Lewis and Clark. He seems like the epitome of "what does not kill you makes you stronger", deliberately laughing in the face of the most infernal of natural and human elements, braving bears, deadly storms, an endless land without direction, fierce tribes and meagre to no supplies of essential food and clothing. He had not just genuine curiosity but genuine empathy for the savage-looking tribes he met, learning their ways and their dialects and working together with them to survive, learn, rescue trapped companions. The first book he wrote after coming back, "Tent Life in Siberia", was an unprecedented account written by a sharp-eyed journalist with a gift for evocative prose which taught Americans about Russia.

"Siberia and the Exile System" was equally vivid. From the pillar at the Siberian border to the innermost reaches of the labor camps, Kennan was given free access by the Tsar and his regime to the prisoners and their families. What Kennan saw horrified him: men with barely anything on their backs marched for hundreds of miles - Bataan death march style - in the most inclement weather, until many of them died on the way; their wives facing an impossible choice of remaining behind and starving to death or accompanying their husbands into conditions so stark that they would starve anyway or would be raped or have to sell themselves into prostitution. The bodies of children in frozen embraces with their parents were not an uncommon sight. Perhaps worst of all were the reasons why these prisoners were condemned to hell in the first place. Most prisoners were condemned to Siberia on trumped up charges based on the flimsiest criticism of the Tsarist regime. Freedom of speech, Kennan saw, was a complete joke in Russia (sounds familiar?).

Everything that we read later about the gulag system had their origin in those horrific exile camps set up by a cruel, indifferent, repressive Russian regime. When Kennan wrote his book, Americans and Russians alike were appalled, albeit for different reasons. For the first time, Americans had their eyes opened to the reality of a country which they had considered their friend. For Russians the book was shocking for the level of detail and the convincing arguments with which Kennan exposed the crudities of their so-called civilization. Reading Kennan's account 50 years later was the best education that his namesake who was the more famous Kennan - the American diplomat George Kennan of containment fame - could get. In his memoirs and writings, the younger Kennan often credits his lesser-known ancestor for grounding him in the realities of the Soviet Union.

After Kennan published "Siberia and the Exile System", Russian-American relations permanently deteriorated. After the murder of Tsar Nicholas, Lenin effectively set up the state as an outlaw state, defined in opposition to the capitalist countries. It is of course impossible to escape a feeling of deja vu reading Kennan's account. There seems to be an almost unbroken thread from Alexander through Nicholas, Lenin, Stalin and all the way to Putin in the repression exerted by Russian strongmen and their henchmen on their own people. Reading this story of a 139-year-old tragedy, one can be forgiven for feeling pessimistic about the future of Russian democracy and human rights. While the internet and new modes of communication have alerted the rest of the world to Russian leaders' excess, it is time for another hardy soul of George Kennan's gifts, resilience and unbounded concern for human welfare to again lay bare the soul of this vast, inscrutable land.

100 Desert Island Books

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Finally got around to making that "100 books I would want on a desert island" list. Another title would be "100 books that I consider essential reading for *my* life": thus, this is a personal selection. I don't claim to have this list cover the most important aspects of human life or the universe, nor do I expect "famous" books to be on this list (although some of them are). The list just reflects my personal traditional interests - history and philosophy of science has the most numbers, followed by science textbooks, general history, philosophy and theology and a tiny sliver of fiction (I started reading fiction seriously quite recently). One condition in listing these books was that I should have read them in their entirety: this is true of all of them except "Gödel, Escher, Bach" which I think I am going to keep soldiering through my whole life. I am very privileged to call some of the authors here my friends.


One common thread running through most of these books is that I discovered them early, when I was in high school, college and graduate school, in most cases in either the college or university library or the British Library which was a stone's throw from where I grew up. Early impressions are often the strongest, so I keep coming back to these volumes and they keep inspiring and instructing me.

I have thousands of books on my shelf and I always find it hard to give any away. There are many others I haven't listed here which I love, but if I actually had just these 100 (110 to be precise), I wouldn't be entirely depressed (just don't tell my significant other...).

HISTORY AND PHILOSOPHY OF SCIENCE (INCLUDING BIOGRAPHY AND AUTOBIOGRAPHY)

Richard Rhodes - The Making of the Atomic Bomb
Richard Rhodes - Dark Sun: The Making of the Hydrogen Bomb
Freeman Dyson - Disturbing the Universe
Freeman Dyson - Infinite in All Directions
George Dyson - Turing’s Cathedral
George Dyson - Darwin Among the Machines
Edward Wilson - Naturalist
Edward Wilson - Consilience
James Gleick - Chaos
John Horgan - The End of Science
Robert Serber - Peace and War
Jeremy Bernstein - Hans Bethe: Prophet of Energy
Silvan Schweber - In the Shadow of the Bomb
Silvan Schweber - QED and the Men Who Made It
David Kaiser - Drawing Theories Apart
Kip Thorne - Black Holes and Time Warps
Robert Kanigel - The Man Who Knew Infinity
Robert Hoffman - The Man Who Loved Only Numbers
Robert Crease and Charles Mann - The Second Creation
Douglas Hofstadter - Gödel, Escher, Bach
Alice Kimball-Smith and Charles Weiner - Robert Oppenheimer: Letters and Recollections
Peter Galison - Image and Logic
Emanuel Derman - My Life as a Quant
Kameshwar Wali - Chandra
John Gribbin - In Search of Schrödinger’s Cat
John Casti - Paradigms Lost
John Casti - The Cambridge Quintet
John Casti - Gödel: A Life in Logic
George Johnson - Strange Beauty
Roger Penrose - The Emperor’s New Mind
Roger Penrose - The Road to Reality
Richard Dawkins - Climbing Mount Improbable
Gerald Durrell - My Family and Other Animals
Konrad Lorenz - King Solomon’s Ring
Robert Laughlin - A Different Universe
Horace Freeland Judson - The Eighth Day of Creation
Peter Michelmore - The Swift Years: The Robert Oppenheimer Story
Richard Feynman - Surely You’re Joking Mr. Feynman
Stanislaw Ulam - Adventures of a Mathematician
Laura Fermi - Atoms in the Family
Werner Heisenberg - Physics and Philosophy
Ronald Clark - Einstein
Steven Pinker - The Blank Slate
David Deutsch - The Beginning of Infinity
Steven Weinberg - Dreams of a Final Theory
J. Robert Oppenheimer - The Open Mind
Stuart Kauffman - Reinventing the Sacred
Barry Werth - The Billion Dollar Molecule
Oliver Sacks - On the Move
Carl Sagan - The Demon-Haunted World
Max Perutz - I Wish I’d Made You Angry Earlier
Jonathan Allday - Quarks, Leptons and the Big Bang
Philip Ball - H2O: A Biography of Water
Philip Ball - The Self-Made Tapestry
Alan Lightman - Einstein’s Dreams
Alan Lightman - The Accidental Universe
Brown, Pais and Pippard - Twentieth Century Physics (3 volumes)
Ed Regis - Who Got Einstein’s Office?
C. P. Snow - The Physicists

TEXTBOOKS

Ira Levine - Quantum Chemistry
Peter Atkins - Molecular Quantum Mechanics
Lubert Stryer - Biochemistry
Albert Lehninger - Biochemistry
George Simmons - Introduction to Topology and Modern Analysis
George Simmons - Differential Equations
Richard Feynman - The Feynman Lectures on Physics
David Griffiths - Introduction to Electrodynamics
John Lee - Inorganic Chemistry
Samuel Glasstone - Sourcebook on Atomic Energy
Samuel Glasstone - Thermodynamics for Chemists
Arthur Beiser - Concepts of Modern Physics
Gautam Desiraju - The Weak Hydrogen Bond
Linus Pauling - The Nature of the Chemical Bond
Linus Pauling and Edward Bright Wilson - Introduction to Quantum Mechanics
Clayden, Warren, Reeves and Wothers - Organic Chemistry
Eric Anslyn and Dennis Dougherty - Modern Physical Organic Chemistry
Wells, Wells and Huxley - The Science of Life
Goodman and Gilman - The Pharmacological Basis of Therapeutics
Jerry March - Advanced Organic Chemistry

HISTORY

Barbara Tuchman - The Guns of August
William Shirer - The Rise and Fall of the Third Reich
James Swanson - Manhunt: The 12-Day Chase for Lincoln’s Killer
David McCullough - Truman
James Scott - Against the Grain
James McPherson - Battle Cry of Freedom
Gordon Wood - Empire of Liberty
John Barry - Roger Williams and the Creation of the American Soul
Bernard Bailyn - The Ideological Origins of the American Revolution
Robert Caro - The Years of Lyndon Johnson (Vols. 1-4)
Rick Atkinson - An Army at Dawn
Will Durant - Our Oriental Heritage
Russell Shorto - The Island at the Center of the World
Nick Bunker - An Empire on the Edge
Brad Gregory - Rebel in the Ranks
Cornelius Ryan - The Longest Day

PHILOSOPHY AND THEOLOGY

Sam Harris - The End of Faith
David Edmonds and John Eidinow - Wittgenstein's Poker
Plato - The Republic
Matthew Stewart - The Courtier and the Heretic
Isaiah Berlin - The Proper Study of Mankind
Bertrand Russell - Unpopular Essays
Bertrand Russell - Why I am Not a Christian

FICTION

Vasily Grossman - Life and Fate
Haruki Murakami - What I Talk About When I Talk About Running
Cormac McCarthy - Blood Meridian
Cormac McCarthy - The Road
Isaac Asimov - Asimov’s Mysteries
Cordwainer Smith - No, No, Not Rogov! (this is a single story but it is very striking in its vividness and poetry and made a deep impression)
Leo Tolstoy - War and Peace
Fyodor Dostoevsky - Notes from the Underground
William Faulkner - As I Lay Dying
H. G. Wells - The Time Machine
Chekhov - Stories

Book review: "Unraveling the Double Helix: The Lost Heroes of DNA", by Gareth Williams.

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Newton rightly decried that science progresses by standing on the shoulders of giants. But his often-quoted statement applies even more broadly than he thought. A case in point: when it comes to the discovery of DNA, how many have heard of Friedrich Miescher, Fred Griffith or Lionel Alloway? Miescher was the first person to isolate DNA, from pus bandages of patients. Fred Griffith performed the crucial experiment that proved that a ‘transforming principle’ was somehow passing from a virulent dead bacterium to a non-virulent live bacterium, magically rendering the non-virulent strain virulent. Lionel Alloway came up with the first expedient method to isolate DNA by adding alcohol to a concentrated solution.

In this thoroughly engaging book, Gareth Williams brings these and other lost heroes of DNA. The book spans the first 85 years of DNA and ends with Watson and Crick's discovery of the structure. There are figures both well-known and obscure here. Along with those mentioned above, there are excellent capsule histories of Gregor Mendel, Thomas Hunt Morgan, Oswald Avery, Rosalind Franklin, Maurice Wilkins and, of course, James Watson and Francis Crick. The book traces a journey through a variety of disciplines, most notably the fields of biochemistry and genetics, that were key in deciphering the structure of DNA and its role in transmitting hereditary characteristics.
Williams’s account begins with Miescher’s isolation of DNA from pus bandages in 1869. At that point in time, proteins were well-recognized, and all proteins contained a handful of elements like carbon, nitrogen, oxygen and sulfur. The one element they did not contain was phosphorus. It was Miescher’s discovery of phosphorus in his extracts that led him and others to propose the existence of a substance they called ‘nuclein’ that seemed ubiquitous in living organisms. The two other towering figures in the biochemical history of DNA are the German chemist Albrecht Kossel and the Russian-born American chemist Phoebus Levene. They figured out the exact composition of DNA and identified its three key components: the sugar, the phosphate and most importantly, the four bases (adenine, cytosine, thymine and guanine). Kossel was such a revered figure that his students led a torchlight procession through the streets from the train station to his lab when he came back to Heidelberg with the Nobel Prize.
Levene’s case is especially interesting since his identification of the four bases set DNA research back by years, perhaps decades. Because there were only four bases, he became convinced that DNA could never be the hereditary material because it was too simple. His ‘tetra-nucleotide hypothesis’ which said that DNA could only have a repeating structure of four bases doomed its candidacy as a viable genetic material for a long time. Most scientists kept on believing that only proteins could be complex enough to be the stuff of heredity.
Meanwhile, while the biochemists were unraveling the nature of DNA in their own way, the geneticists paved the way. Williams has a brisk but vivid description of the lone monk Gregor Mendel toiling away with thousands of meticulous experiments on pea plants in his monastery in the Moravian town of Brünn. As we now know, Mendel was fortunate in picking the pea plant since it’s a purebred species. Mendel’s faith in his own work was shaken toward the end of his life when he tried to duplicate his experiments using the hawkweed plant whose genetics are more complex. Tragically, Mendel’s notebooks and letters were burnt after his death and his work was forgotten for thirty years before it was resurrected independently by three scientists, all of whom tried to claim credit for the discovery. The other major figure in genetics during the first half of the 20th century was Thomas Hunt Morgan whose famous ‘fly room’ at Columbia University carried our experiments showing the presence of hundreds of genes are precise locations on chromosomes. In his lab, there was a large pillar on which Morgan and his students drew the locations of new genes.
From the work of Mendel, Morgan, Levene and Kossel we move on to New York City where Oswald Avery, Colin MacLeod and Maclyn McCarty at the Rockefeller University and the sharp-tongued, erudite Erwin Chargaff at Columbia made two seminal discoveries about DNA. Avery and his colleagues showed that DNA is in fact the ‘transforming principle’ that Fred Griffith had identified. Chargaff showed that the proportions of A and T and G and C in DNA were similar. Williams says in the epilogue that of all the people who were potentially robbed of Nobel Prizes for DNA, the two most consequential were Avery and Griffith.
By this time, along with biochemistry and genetics, x-ray crystallography had started to become very prominent in the study of molecules: by shining x-rays on a crystal and interpreting the resulting diffraction pattern, scientists could potentially figure out the structure of the molecule on an atomic level. Williams provides an excellent history of this development, starting with the Nobel Prize-winning father-son duo of William Henry and William Lawrence Bragg (who remains the youngest Nobel Laureate at age 25) and continuing with other pioneering figures like J. D. Bernal, William Astbury, Dorothy Hodgkin and Linus Pauling.
Science is done by scientists, but it’s made possible by science administrators. Two major characters star in the DNA drama as science administrators par excellence. Both had their flaws, but without the institutions they set up to fund and encourage biological work, it is doubtful whether the men and women who discovered DNA and its structure would have made the discoveries when and where they did. William Lawrence Bragg repurposed the famed Cavendish Laboratories at Cambridge University – where Ernest Rutherford had reigned supreme - for crystallographic work on biological molecules. A parallel effort was started by John Randall, a physicist who had played a critical role in Britain’s efforts to develop radar during World War 2, at King’s College in London. While Bragg recruited Max Perutz, Francis Crick and James Watson for his group, Randall recruited Maurice Wilkins, Ray Gosling and Rosalind Franklin.
One of the strengths of Williams’s book is that it resurrects the role of Maurice Wilkins who is often regarded as the least important of the Nobel Prize-winning triplet of Watson, Crick and Wilkins. In fact, it was Wilkins and Gosling who took the first x-ray photographs of DNA that seemed to indicate a helical structure. Wilkins was also convinced that DNA and not protein was the genetic material when that view was still unfashionable; he passed on his infectious enthusiasm to Crick and Watson. But even before his work, the Norwegian crystallographer Sven Furberg had been the first to propose a helix – although a single one – as the structure of DNA based on his density and other important features. A key feature of Furberg’s model was that the sugar and the base were perpendicular, which is in fact the case with DNA.
The last third of the book deals with the race to discover the precise structure of DNA. This story has been told many times, but Williams tells it exceptionally well and especially drives home how Watson and Crick were able to stand on the shoulders of many others. Rosalind Franklin comes across as a fascinating, complex, brilliant and flawed character. There was no doubt that she was an exceptional scientist who was struggling to make herself heard in a male-dominated establishment, but it’s also true that her prickly and defensive personality made her hard to work with. Unlike Watson, she was especially reluctant to build models, perhaps because she had identified a fatal flaw in one of the pair’s earlier models. It’s not clear how close Franklin came to identifying DNA as a helix; experimentally she came close, but psychologically she seemed reluctant and bounced back and forth between helical and non-helical structures.
So what did Watson and Crick have that the others did not? As I have described in a post written a few years ago on the 70th anniversary of the DNA structure, many others were in possession of key parts of the evidence, but only Watson and Crick put it all together and compulsively built models. In this sense it was very much like the blind men and the elephant; only Watson and Crick bounced around the entire animal and saw how it was put together. Watson’s key achievement was recognizing the precise base pairing: adenine with thymine and guanine with cytosine. Even here he was helped by the chemist Jerry Donohue who corrected a key chemical feature of the bases (organic chemists will recognize it as what’s called keto-enol tautomerism). Also instrumental were Alec Stokes and John Griffith. Stokes was a first-rate mathematician who, using the theory of Bessel functions, figured out the diffraction pattern that would correspond to a helix; Crick who was a physicist well-versed with the mathematics of diffraction, instantly understood Stokes’s work. Griffith was a first-rate quantum chemist who figured out, independently of Donohue, that A would pair with T and G with C. Before the advent of computers and what are called ab initio quantum chemical techniques, this seems like a remarkable achievement.
With Chargaff’s knowledge of the constancy of base ratios, Donohue’s precise base structures, Franklin and Gosling’s x-ray measurements and Stokes’s mathematics of helix diffraction patterns, Watson and Crick had all the information they needed to try out different models and cross the finish line. No one else had this entire map of information at their disposal. The rest, as they say, is history.
I greatly enjoyed reading Williams’s book. It is, perhaps, the best book on the DNA story that I have read since Horace Freeland Judson’s “The Eighth Day of Creation”. Even characters I was familiar with newly come to life as flawed, brilliant human beings with colorful lives. The account shows that many major and minor figures made important discoveries about DNA. Some came close to figuring out the structure but never made the leap, either because they lacked data or because of personal prejudices. Taken as a whole, the book showcases well the intrinsically human story and the group effort, playing out over 85 years, at the heart of the one of the greatest discoveries that humanity has made. I highly recommend it.

A Foray into Jewish History and Judaism

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I have always found the similarities between Hinduism and Judaism (and between Hindu Brahmins in particular and Jews) very striking. In order of increasing importance:

1. Both religions are very old, extending back unbroken between 2500 and 3000 years with equally old holy books and rituals.

2. Both religions place a premium on rituals and laws like dietary restrictions etc.

3. Hindus and Jews have both endured for a very long time in spite of repeated persecution, exile, oppression etc. although this is far more true for Jews than Hindus. Of course, the ancestors of Brahmins have the burden of caste while Jews have no such thing, but both Hindus and Jews have been persecuted for centuries by Muslims and Christians. At the same time, people of both faiths have also lived in harmony and productive intercourse with these other faiths for almost as long.

4. Both religions place a premium on the acquisition and dissemination of knowledge and learning. Even today, higher education is a priority in Jewish and Hindu families. As a corollary, both religions also place a premium on fierce and incessant argumentation and are often made fun of for this reason.

5. Both religions are unusually pluralistic, secular and open to a variety of interpretations and lifestyles without losing the core of their faith. You can be a secular Jew or an observant one, a zealous supporter or harsh critic of Israel, a Jew who eats pork and still calls himself a Jew. You can even be a Godless Jewish atheist (as Freud called himself). Most importantly, as is prevalent especially in the United States, you can be a “cultural Jew” who enjoys the customs not because of deep faith but because it fosters a sense of community and tradition. Similarly, you can be a highly observant Hindu, a flaming Hindu nationalist, an atheist Hindu who was raised in the tradition but who is now a “cultural Hindu” (like myself), a Hindu who commits all kinds of blasphemies like eating steak and a Hindu who believes that Hinduism can encompass all other faiths and beliefs.

I think that it’s this highly pluralistic and flexible belief and tradition system that has made both Judaism and Hinduism what Nassim Taleb calls “anti-fragile”, not just resilient but being able to be actively energized in the face of bad events. Not surprisingly, Judaism has always been a minor but constant interest of mine, and there is no single group of people I admire more. The interest has always manifested itself previously in my study of Jewish scientists like Einstein, Bethe, von Neumann, Chargaff and Ulam, many of whom fled persecution and founded great schools of science and learning. More broadly though, although I am familiar with the general history, I am planning to do a deeper dive into Jewish history this year. Here is a list of books that I have either read (*), am reading ($) or planning to read (+). I would be interested in recommendations.

1. Paul Johnson’s “The History of the Jews”. (*)

2. Simon Schama’s “The Story of the Jews”. (*)

3. Jane Gerber’s “The Jews of Spain”. ($)

4. Nathan Katz’s “The Jews of India”. (*)

5. Amos Elon’s “The Pity of It All: A Portrait of the German-Jewish experience, 1743-1933”. ($)

6. Norman Lebrecht’s “Genius and Anxiety: How Jews Changed the World: 1847-1947”. ($)

7. Erwin Chargaff’s “Heraclitean Fire”. (*)

8. Stanislaw Ulam’s “Adventures of a Mathematician”. (*)

9. Stefan Zweig’s “The World of Yesterday”. (*)

10. Primo Levi’s “Survival in Auschwitz” and “The Periodic Table”. (*)

11. Robert Wistrich’s “A Lethal Obsession: Anti-Semitism from Antiquity to the Global Jihad”. (*)

12. Jonathan Kaufman’s “The Last Kings of Shanghai”. (This seems quite wild) (+)

13. Istvan Hargittai’s “The Martians of Science”. (*)

14. Bari Weiss’s “How to Fight Anti-Semitism”. (+)

15. Ari Shavit’s “My Promised Land”. (+)

16. Norman Cohn’s “Warrant for Genocide: The Myth of the Jewish World Conspiracy and the Protocols of the Elders of Zion” (*)

17. Irving Howe’s “World of Our Fathers: The Journey of the East European Jews to America and the Life They Found and Made“ (+)

18. Edward Kritzler’s “Jewish Pirates of the Caribbean” (another book that sounds wild) (+)

19. Alfred Kolatch’s “The Jewish Book of Why” (+)

20. Simon Sebag-Montefiore’s “Jerusalem” ($)

Life. Distributed.

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One of my favorite science fiction novels is “The Black Cloud” by Fred Hoyle. It describes an alien intelligence in the form of a cloud that approaches the earth and settles by the sun. Because of its proximity to the sun the cloud causes havoc with the climate and thwarts the attempts of scientists to both study it and attack it. Gradually the scientists come to realize that the cloud is an intelligence unlike any they have encountered. They are finally successful in communicating with the cloud and realize that its intelligence is conveyed by electrical impulses moving inside it. The cloud and the humans finally part on peaceful terms.

There are two particularly interesting aspects of the cloud that warrant further attention. One is that it’s surprised to find intelligence on a solid planet; it is used to intelligence being gaseous. The second is that it’s surprised to find intelligence concentrated in individual human minds; it is used to intelligence constantly moving around. The reason these aspects of the story are interesting is because they show that Hoyle was ahead of his time and was already thinking about forms of intelligence and life that we have barely scratched the surface of.

Our intelligence is locked up in a three pound mass of wet solid matter. And it’s a result of the development of the central nervous system. The central nervous system was one of the great innovations in the history of life. It allowed organisms to concentrate their energy and information-processing power in a single mass that sent out tentacles communicating with the rest of the body. The tentacles are important but the preponderance of the brain’s capability resides in itself, in a single organ that cannot be detached or disassembled and moved around. From dolphins to tigers and from bonobos to humans, we find the same basic plan existing for good reasons. The central nervous system is an example of what’s called convergent evolution, which refers to the ability of evolution to find the same solutions for complex problems. Especially in Homo sapiens, the central nervous system and the consequent development of the neocortex are seen as the crowning glory of human evolution.

And yet it’s the solutions that escaped the general plan that are the most interesting in a sense. Throughout the animal and plant kingdom we find examples not of central but of distributed intelligence, like Hoyle’s cloud. Octopuses are particular fascinating examples. They can smell and touch and understand not just through their conspicuous brains but through their tentacles; they are even thought to “see” color through these appendages. But to find the ultimate examples of distributed intelligence, it might be prudent not to look at earth’s most conspicuous and popular examples of life but its most obscure – fungi. Communicating the wonders of distributed intelligence through the story of fungi is what Merlin Sheldrake accomplishes in his book, “Entangled Life”.

Fungi have always been our silent partners, partners that are much more like us than we can imagine. Like bacteria they are involved in an immense number of activities that both aid and harm human beings, but most interestingly, fungi unlike bacteria are eukaryotes and are therefore, counterintuitively, evolutionarily closer to us rather than to their superficially similar counterparts. And they get as close to us as we can imagine. Penicillin is famously produced by a fungus; so is the antibiotic fluconazole that is used to kill other fungal infections. Fungal infections can be deadly; Aspergillus forms clumps in the lungs that can rapidly kill patients by spreading through the bloodstream. Fungi of course charm purveyors of gastronomic delights everywhere in the world as mushrooms, and they also charm purveyors of olfactory delights as truffles; a small lump can easily sell for five thousand dollars. Last but not the least, fungi have taken millions of humans into other worlds and artistic explosions of colors and sight by inducing hallucinations.

With this diverse list of vivid qualities, it may seem odd that perhaps the most interesting quality of fungi lies not in what we can see but what we can’t. Mushrooms may grace dinner plates in restaurants and homes around the world, but they are merely the fruiting bodies of fungi. They may be visible as clear vials of life-saving drugs in hospitals. But as Sheldrake describes in loving detail, the most important parts of the fungi are hidden below the ground. These are the vast networks of the fungal mycelium – the sheer, gossamer, thread-like structure snaking its way through forests and hills, sometimes spreading over hundreds of square miles, occasionally being as old as the neolithic revolution, all out of sight of most human beings and visible only to the one entity with which it has forged an unbreakable, intimate alliance – trees. Dig a little deep into a tree root and put it under a microscope and your will find wisps of what seem like even smaller roots, except that these roots penetrate into the trees roots. The wisps are fungal mycelium. They are everywhere; around roots, under them, over them and inside them. At first glance the the ability of fungal networks to penetrate inside tree roots might evoke pain and invoke images of an unholy literal physical union of two species. It’s certainly a physical union, but it may be one of the holiest meetings of species in biology. In fact it might well be impossible to find a tree whose roots have no interaction with fungal mycelium. The vast network of fibers the mycelium forms is called a mycorrhizal network.

The mycorrhizal networks that wind their way in and out of tree roots are likely as old as trees themselves. The alliance almost certainly exists because of a simple matter of biochemistry. When plants first colonized land they possessed the miraculous ability of photosynthesis that completely changed the history of life on this planet. But unlike carbon which they can literally manufacture out of sunlight and thin air, they still have to find essential nutrients for life, metals like magnesium and other life-giving elements like phosphorus and nitrogen. Because of an intrinsic lack of mobility, plants and trees had to find someone who could bring them these essential elements. The answer was fungi. Fungal networks stretching across miles ensured that they could shuttle nutrients back and forth between trees. In return the fungi could consume the precious carbon that the tree sank into its body – as much as twenty tons during a large tree’s lifetime. It was the classic example of symbiosis, a term coined by the German botanist Albert Frank, who also coined the term mycorrhiza.

However, the discovery that fungal networks could supply trees with essential nutrients in a symbiotic exchange was only the beginning of the surprises they held. Sheldrake talks in particular about the work of the mycologists Lynne Body and Suzanne Simard who have found qualities in the mycorrhizal networks of trees that can only be described as deliberate intelligence. Here are a few examples: fungi seem to “buy low, sell high”, providing trees with important elements when they have fallen on hard times and liberally borrowing from them when they are doing well. Mycorrhizal networks also show electrical activity and can discharge a small burst of electrochemical potential when prodded. They can entrap nematodes in a kind of death grip and extract their nutrients; they can do the same with ants. Perhaps most fascinatingly, fungal mycelia display “intelligence at a distance”; one part of a huge fungal network seems to know what the other is doing. The most striking experiment that demonstrates this shows oyster mushroom mycelium growing on a piece of wood and spreading in all directions. When another piece of wood is kept at a distance, within a few days the fungal fibers spread and latch on to that piece. This is perhaps unsurprising. What is surprising is that once the fungus discovers this new food source, it almost instantly pares down growth in all other parts of its network and concentrates it in the direction of the new piece of wood. Even more interestingly, scientists have found that the hyphae or tips of fungi can act not only as sensors but as primitive Boolean logic gates, opening and closing to allow only certain branches of the network to communicate with each other. There are even attempts to use fungi as primitive computers.

This intelligent long-distance relay gets mirrored in the behavior of the trees that the fungi form a mind meld with. One of the characters in Richard Powers’s marvelous novel “The Overstory” discovers how trees are whispering hidden signals to each other, not just through fungal networks but through ordinary chemical communication. The character Patty Westford finds out that when insects attack one tree, it can send out a chemical alarm that alerts trees located even dozens of meters away of its plight, causing them to kick their own repellant chemical production into high gear. Meeting the usual fate of scientists with novel ideas, Westford and her ideas are first ignored, then mocked and ostracized and ultimately grudgingly accepted. But the discovery of trees and their fungal networks communicating through each other and through the agency of both chemicals and other organisms like insects is now generally accepted enough to become part of both serious scientific journals and prizewinning novels.

Fungi can also show intelligent behavior by manipulating our minds, and this is where things get speculative. Psilocybin and LSD have been used by shamans, hippies and Silicon Valley tech entrepreneurs over thousands of years. When you are familiar with both chemistry and biology it’s natural to ask what might be the perceived evolutionary utility of chemical compounds that bring about changes in perception that are so profound and seemingly liberating as to lead someone like Aldous Huxley to make sure that he was on a psychedelic high during the moment of his death. One interesting clue arises from the discovery of these compounds in the chemical defense responses of certain fungi. Clearly the microorganisms that are engaged in a war with fungi – and these often include other fungi – lack a central nervous system and have no concept of a hallucination. But if these compounds are found as part of the wreckage of fungal wars, maybe this was their original purpose, and the fact that they happen to take humans on a trip is only incidental.

That is the boring and likely explanation. The interesting and unlikely explanation that Sheldrake alludes to is to consider a human, in the medley of definitions that humans have lent themselves to, as a vehicle for a fungus to propagate itself. In the Selfish Fungus theory, magic mushrooms and ergot have been able to hijack our minds so that more of us will use them, cultivate and tend them and love them, ensuring their propagation. Even though their effects might be incidental, they can help us in unexpected ways. If acid and psilocybin trips can spark even the occasional discovery of a new mathematical object or a new artistic style, both the fungi and the humans’ purpose is served. I have another interesting theory of psychedelic mushroom-human co-evolution in mind that refers to Julian Jaynes’s idea of the bicameral mind. According to Jaynes, humans may have lacked consciousness until as recently as 3000 years ago because their mind was divided into two parts, one of which “spoke” and the other “listened”. What we call Gods speaking to humans was a result of the speaking side holding forth. Is it possible that at some point in time, humans got hold of psychedelic fungi and they hijacked a more primitive version of the speaking mind that allowed it it to turn into a full-blown voice inside the other mind’s head, so to speak? Jaynes’s theory has been called “either complete rubbish or a work of consummate genius, nothing in between” by Richard Dawkins, and this might be another way to probe whether it might be true for a reason.

It is all too easy to anthropomorphize trees and especially fungi, which only indicates how interestingly they behave. One can say that “trees give and trees receive”, “trees feel” and even “trees know”, but at a biological level is this behavior little more than a series of Darwinian business transactions, purely driven by natural selection and survival? Maybe, but ultimately what matters is not what we call the behavior but the connections it implies. And there is no doubt that fungi, trees, octopuses and a few other assorted creatures are displaying a unique type of intelligence that humans may have merely glimpsed. Distributed intelligence clearly has a few benefits over a central, localized one. Unlike humans who are unlikely to live when their heads are cut off, newts can regrow their heads when they get detached, so there’s certainly a survival advantage conferred by not having your intelligence organ be one and done. This principle has been exploited by the one form of distributed intelligence that is an extension of human beings and that has taken over the planet – the Internet. Among many ideas that are regarded as the origins of the Internet, one was conceived by the defense department which wanted to built a communications net that would be resilient in the face of nuclear attack. Having a distributed network with no one node being a central node was the key. Servers in companies like Google and Facebook are also constructed in such a way that a would be hacker or terrorist would have to take out several and not just a few in order to measurably impair the fidelity of the network.

I also want to posit the possibility that distributed systems might be more analog than central ones and therefore confer unique advantages. Think of a distributed network of water pipes, arteries, traffic lanes or tree roots and fungal networks and one has the image in mind of a network that can almost instantaneously transmit changes in parameters like pressure, temperature and density taking place in one part of the network to another. These are all good examples of analog computation, although in case of arteries, the analog process is built on a substrate of digital neuronal firing. The human body is clearly a system where a combination of analog and digital works well, but looking at distributed intelligence one gets a sense that we can optimize our intelligence significantly using more analog computing.

There is no reason why intelligence may not be predominantly analog and distributed so that it becomes resilient, sensitive and creative like mycorrhizal networks, being able to guard itself against existential threats, respond to new food and resource locations and construct new structures with new form and function. One way to make human intelligence more analog and distributed would be to enable human-to-human connections through high-fidelity electronics that allows a direct flow of information to and from human brains. But a more practical solution might be to enable downloading brain contents including memory into computers and then allowing these computers to communicate with each other. I do not know if this advance will take place during my lifetime, but it could certainly bring us closer to being a truly distributed intelligence that just like mycorrhizal networks is infinitely responsive, creative, resilient and empathetic. And then perhaps we will know exactly what it feels like to be a tree.