Package: MGFR 1.37.0
Khadija El Amrani
MGFR: Marker Gene Finder in RNA-seq data
The package is designed to detect marker genes from RNA-seq data.
Authors:
MGFR_1.37.0.tar.gz
MGFR_1.37.0.zip(r-4.6)MGFR_1.37.0.zip(r-4.5)MGFR_1.37.0.zip(r-4.4)
MGFR_1.37.0.tgz(r-4.6-any)MGFR_1.37.0.tgz(r-4.5-any)
MGFR_1.37.0.tar.gz(r-4.6-any)MGFR_1.37.0.tar.gz(r-4.5-any)
MGFR_1.37.0.tgz(r-4.5-emscripten)
MGFR.pdf |MGFR.html✨
MGFR/json (API)
NEWS
| # Install 'MGFR' in R: |
| install.packages('MGFR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- ref.mat - RNA-seq gene expression data set
On BioConductor:MGFR-1.37.0(bioc 3.23)MGFR-1.35.0(bioc 3.22)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
immunooncologygeneticsgeneexpressionrnaseq
Last updated from:01c645bf1c. Checks:2 ERROR, 8 OK. Indexed: yes.
| Target | Result | Total time | Artifact |
|---|---|---|---|
| bioc-checks | ERROR | 156 | |
| linux-devel-x86_64 | OK | 275 | |
| source / vignettes | OK | 252 | |
| linux-release-x86_64 | OK | 280 | |
| macos-devel-arm64 | OK | 216 | |
| macos-release-arm64 | OK | 237 | |
| windows-devel | OK | 176 | |
| windows-release | OK | 172 | |
| windows-oldrel | ERROR | 149 | |
| wasm-release | OK | 110 |
Exports:getMarkerGenes.rnaseqgetMarkerGenes.rnaseq.html
Dependencies:annotateAnnotationDbiaskpassBiobaseBiocFileCacheBiocGenericsbiomaRtBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrfastmapfilelockgenericsgluehmshttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigplogrpngprettyunitsprogresspurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXMLxml2xtableXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Marker Gene Finder in RNA-seq data | MGFR-package MGFR |
| Marker Gene Detection | getMarkerGenes.rnaseq |
| Marker Gene Detection | getMarkerGenes.rnaseq.html |
| RNA-seq gene expression data set | ref.mat |
