request for R package RAQSAPI submission

[mccroweyclinton-EPA]

Submitting Author Name: Clinton Mccrowey
Submitting Author Github Handle: @mccroweyclinton-EPA
Repository: https://github.com/USEPA/RAQSAPI
Version submitted: v2.0.5
Submission type: Standard
Editor: @ldecicco-USGS
Reviewers: @milanmlft, @rkrug

Archive: TBD
Version accepted: TBD
Language: en

---

• Paste the full DESCRIPTION file inside a code block below:

Type: Package
Package: RAQSAPI
Version: 2.0.6
Title: A Simple Interface to the US EPA Air Quality System Data Mart API
Description: Retrieve air monitoring data and associated metadata from the US
  Environmental Protection Agency's Air Quality System service using functions.
  See <https://aqs.epa.gov/aqsweb/documents/data_api.html> for details about
  the US EPA Data Mart API <doi: 10.32614/CRAN.package.RAQSAPI>.
Encoding: UTF-8
Authors@R: c(person(given="Clinton", family="Mccrowey",
                    email="mccrowey.clinton@epa.gov",
                    role=c("cre", "aut"),
                    comment="United States Environmental Protection
                             Agency Region 3 Air and Radiation Division"),
             person(given="Timothy", family="Sharac", role=c("ctb","rev"),
                    email=NULL,
                    comment="United States Environmental Protection Agency"),
             person(given = "Nick", family = "Mangus", email = NULL,
                    role=c("rev"),
                    comment="United States Environmental Protection Agency"),
             person(given = "Doug", family = "Jager",
                    email=NULL, role=c("ctb", "rev"),
                    comment="United States Environmental Protection Agency"),
             person(given = "Ryan",family = "Brown",
                    email=NULL, role=c("ctb", "rev"),
                    comment="United States Environmental Protection Agency"),
             person(given = "Daniel", family = "Garver",
                    email=NULL, role=c("ctb", "rev"),
                    comment="United States Environmental Protection Agency"),
             person(given = "Benjamin", family = "Wells",
                    email=NULL, role=c("ctb", "rev"),
                    comment="United States Environmental Protection Agency"),
             person(given = "Hayley", family= "Brittingham",
                    email = NULL, role=c("rev", "ctr"),
                    comment="Neptune and Company"),
             person(given = "Jeffrey", family = "Hollister",
                    email = "hollister.jeff@epa.gov", role = c("rev"),
                    comment = c("United States Environmental Protection Agency",
                                ORCID = "0000-0002-9254-9740"
                                )
                    ),
            person(given = "Edward", family = "Andrews",
                   email = "edward.s.andrews@wv.gov",
                   role = c("rev", "ctb"),
                   comment = "West Virginia Department of Environmental Protection, Division of Air Quality"
                  ),
            person(given= "Cynthia", family = "Stahl",
                   email = "stahl.cynthia@epa.gov",
                   role="rev",
                   comment=("United States Environmental Protection
                            Agency Region 3 Air and Radiation Division")
                  ),
            person(given= "Maria", family="Morresi",
                   email="Morresi.Maria@epa.gov",
                   role=c("ctr", "rev"),
                   comment="ASRC Federal"
                   )
            )
URL: https://github.com/USEPA/RAQSAPI/,
     https://aqs.epa.gov/aqsweb/documents/data_api.html
BugReports: https://github.com/USEPA/RAQSAPI/issues
Depends: R (>= 4.0.0)
Imports: dplyr,
    glue,
    gtools,
    httr2,
    lifecycle,
    lubridate,
    methods,
    magrittr,
    purrr,
    rlang,
    stringr,
    tibble,
    tidyselect
Suggests: cli,
    covr,
    devtools,
    goodpractice,
    httptest2,
    keyring,
    knitr,
    rmarkdown,
    remotes,
    roxygen2,
    spelling,
    testthat (>= 3.0.0),
    usethis,
    withr
SystemRequirements: package manual and Vignettes require pandoc
                    (>= 1.14) http://pandoc.org)
RoxygenNote: 7.3.3
VignetteBuilder: knitr
BuildVignettes: true
ByteCompile: true
License: MIT + file LICENSE
License_is_FOSS: yes
NeedsCompilation: no
License_restricts_use: no
Language: en-US
Collate:
    'AQS_DATAMART_APIv2-S3-class.R'
    'AQSAPI_helperfunctions.R'
    'bysite.R'
    'bycounty.R'
    'bystate.R'
    'byma.R'
    'bypqao.R'
    'bycbsa.R'
    'bybox.R'
    'RAQSAPIlistfunctions.R'
    'setupfunctions.R'
    'zzz.R'
    'RAQSAPI-package.R'
    'deprecated.R'
Copyright: United States Environmental Protection Agency
RdMacros: lifecycle
Roxygen: list(markdown = TRUE)
Config/testthat/edition: 3
X-schema.org-keywords: United State Environmental Protection Agency,
                       Environmental-data-retrieval, Air-Quality-System,
                       AQS-DataMart, Air-monitoring, Environmental-monitoring
Config/testthat/load-all: list(export_all = FALSE, helpers = FALSE)

Scope

• Please indicate which category or categories from our package fit policies this package falls under: (Please check an appropriate box below. If you are unsure, we suggest you make a pre-submission inquiry.):

  • data retrieval
  • data extraction
  • data munging
  • data deposition
  • data validation and testing
  • workflow automation
  • version control
  • citation management and bibliometrics
  • scientific software wrappers
  • field and lab reproducibility tools
  • database software bindings
  • geospatial data
  • translation

• Explain how and why the package falls under these categories (briefly, 1-2 sentences):

RAQSAPI is a R package that was designed specifically as a simple interface to the US Environmental Protection Agency Air Quality System Data Mart API which is a data store of ambient air pollution data collected by EPA, state, local, and tribal air pollution control agencies from over thousands of monitors. AQS also contains meteorological data, descriptive information about each monitoring station (including its geographic location and its operator), and data quality assurance/quality control information.

• Who is the target audience and what are scientific applications of this package?

Environmental scientists, data scientist, Federal, State, Local, Tribal Air monitoring agencies. Community groups. Citizens concerned about the quality of air in the US.

• Are there other R packages that accomplish the same thing? If so, how does yours differ or meet our criteria for best-in-category?

aqsr, RAQSAPI is still under active development and will be updated reflecting future changes to the AQS Data MART API. RAQSAPI is developed by EPA staff. RAQSAPI allows for multi year data pulls. Also RAQSAPI is the only package that I am aware of that is available from CRAN.

• (If applicable) Does your package comply with our guidance around Ethics, Data Privacy and Human Subjects Research?

YES

• If you made a pre-submission inquiry, please paste the link to the corresponding issue, forum post, or other discussion, or @tag the editor you contacted.

#712

• Explain reasons for any pkgcheck items which your package is unable to pass.

Technical checks

Currently I have pkgcheck to only check for issues in the main branch most of these issues are old, some have been resolved in other branches.

✖️ Package coverage failed
✖️ R CMD check found 1 error

I believe both of these issues are related to issues that I am currently having with implementing mock test with R package:httptest2. Several members of the Ropensci team is currently helping me to work out these issues.

✖️ does not have a 'contributing' file.
currently pkgcheck only checks for issues in the main branch. the branch "test_httptest2" contains the current version of the contributing.md file and will be merged into main in the future. If required now I can commit it to main.

Confirm each of the following by checking the box.

• I have read the rOpenSci packaging guide.
• I have read the author guide and I expect to maintain this package for at least 2 years or to find a replacement.

This package:

• does not violate the Terms of Service of any service it interacts with.
• has a CRAN and OSI accepted license.
• contains a README with instructions for installing the development version.
• includes documentation with examples for all functions, created with roxygen2.
• contains a vignette with examples of its essential functions and uses.
• has a test suite.
• has continuous integration, including reporting of test coverage.

Publication options

• Do you intend for this package to go on CRAN?

• Do you intend for this package to go on Bioconductor?

• Do you wish to submit an Applications Article about your package to Methods in Ecology and Evolution? If so:

MEE Options

• The package is novel and will be of interest to the broad readership of the journal.
• The manuscript describing the package is no longer than 3000 words.
• You intend to archive the code for the package in a long-term repository which meets the requirements of the journal (see MEE's Policy on Publishing Code)
• (Scope: Do consider MEE's Aims and Scope for your manuscript. We make no guarantee that your manuscript will be within MEE scope.)
• (Although not required, we strongly recommend having a full manuscript prepared when you submit here.)
• (Please do not submit your package separately to Methods in Ecology and Evolution)

Code of conduct

• I agree to abide by rOpenSci's Code of Conduct during the review process and in maintaining my package should it be accepted.

[ropensci-review-bot]

Thanks for submitting to rOpenSci, our editors and @ropensci-review-bot will reply soon. Type @ropensci-review-bot help for help.

[ropensci-review-bot]

🚀

Editor check started

👋

[ropensci-review-bot]

Checks for RAQSAPI (v2.0.6)

git hash: fe8633cb

• ✔️ Package is already on CRAN.
• ✖️ does not have a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✖️ Package fails continuous integration checks.
• ✖️ Package coverage failed
• ✔️ All goodpractice linters passed.
• ✖️ R CMD check found 1 error.
• ✔️ R CMD check found no warnings.
• 👀 Examples should not use \dontrun{} unless really necessary.

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	RAQSAPI	315
internal	base	101
internal	stats	4
internal	utils	1
imports	purrr	206
imports	dplyr	15
imports	tibble	6
imports	tidyselect	6
imports	lubridate	3
imports	glue	2
imports	rlang	2
imports	stringr	2
imports	httr2	1
imports	methods	1
imports	lifecycle	NA
imports	magrittr	NA
suggests	covr	NA
suggests	devtools	NA
suggests	goodpractice	NA
suggests	httptest2	NA
suggests	keyring	NA
suggests	knitr	NA
suggests	markdown	NA
suggests	rmarkdown	NA
suggests	roxygen2	NA
suggests	spelling	NA
suggests	testthat	NA
suggests	usethis	NA
suggests	withr	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

RAQSAPI

aqsmultiyearparams (64), aqs_services_by_county (42), aqs_services_by_site (42), aqs_services_by_state (42), aqs_services_by_MA (27), aqs_services_by_pqao (24), aqs_services_by_cbsa (15), aqs_services_by_box (14), aqs (11), format_multiple_params_for_api (7), aqs_metadata_service (3), aqs_annualsummary_by_box (1), aqs_annualsummary_by_cbsa (1), aqs_annualsummary_by_county (1), aqs_annualsummary_by_site (1), aqs_annualsummary_by_state (1), aqs_cbsas (1), aqs_classes (1), aqs_counties_by_state (1), aqs_credentials (1), aqs_dailysummary_by_box (1), aqs_dailysummary_by_cbsa (1), aqs_dailysummary_by_county (1), aqs_dailysummary_by_site (1), aqs_dailysummary_by_state (1), AQS_DATAMART_APIv2_validator (1), aqs_fields_by_service (1), aqs_isavailable (1), aqs_knownissues (1), aqs_mas (1), aqs_monitors_by_box (1), aqs_monitors_by_cbsa (1), aqs_monitors_by_county (1), aqs_monitors_by_site (1), RAQSAPI_error_msg (1)

purrr

pmap (206)

base

c (35), format (28), list (19), with (4), character (2), class (2), vector (2), I (1), length (1), message (1), names (1), paste (1), return (1), sys.call (1), Sys.getenv (1), sys.parent (1)

dplyr

select (6), between (4), rename (4), bind_rows (1)

tibble

tibble (6)

tidyselect

where (6)

stats

filter (4)

lubridate

NA_Date_ (3)

glue

glue (2)

rlang

abort (1), call_name (1)

stringr

str_c (1), str_detect (1)

httr2

last_response (1)

methods

as (1)

utils

tail (1)

NOTE: Some imported packages appear to have no associated function calls; please ensure with author that these 'Imports' are listed appropriately.

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (99% in 14 files) and YAML (1% in 1 files)
• 1 authors
• 13 vignettes
• no internal data file
• 12 imported packages
• 93 exported functions (median 12 lines of code)
• 141 non-exported functions in R (median 16 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	14	76.6
files_inst	1	89.4
files_vignettes	22	100.0
files_tests	14	94.4
loc_R	1876	86.6
loc_inst	4	8.1
loc_vignettes	1958	97.3	TRUE
loc_tests	933	85.1
num_vignettes	13	99.4	TRUE
n_fns_r	234	93.5
n_fns_r_exported	93	95.5	TRUE
n_fns_r_not_exported	141	91.8
n_fns_per_file_r	9	90.8
num_params_per_fn	7	88.3
loc_per_fn_r	13	57.4
loc_per_fn_r_exp	12	49.8
loc_per_fn_r_not_exp	16	67.3
rel_whitespace_R	20	88.2
rel_whitespace_inst	25	9.3
rel_whitespace_vignettes	14	90.2
rel_whitespace_tests	11	74.5
doclines_per_fn_exp	84	88.5
doclines_per_fn_not_exp	0	0.0	TRUE
doclines_per_fn_src	2	96.1	TRUE
fn_call_network_size	172	88.8

---

2a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

---

3b. goodpractice results

R CMD check with rcmdcheck

R CMD check generated the following error:

1. checking tests ...
   Running ‘spelling.R’
   Comparing ‘spelling.Rout’ to ‘spelling.Rout.save’ ... OK
   Running ‘testthat.R’
   ERROR
   Running the tests in ‘tests/testthat.R’ failed.
   Last 13 lines of output:
   5. ├─dplyr::pull(., status)
   6. ├─RAQSAPI::aqs_isavailable()
   7. │ ├─... %>% return()
   8. │ └─RAQSAPI:::aqs(...)
   9. │ └─AQSrequest %>% req_perform(verbosity = 0)
   10. └─httr2::req_perform(., verbosity = 0)
   11. └─httptest2 (local) mock(req)
   12. └─httptest2::find_mock_file(f)
   13. ├─base::paste0("^\Q", basename(mp), "\E.[[:alnum:]]*$")
   14. └─base::basename(mp)

[ FAIL 73 | WARN 1 | SKIP 0 | PASS 26 ]
Error:
! Test failures.
Execution halted

R CMD check generated the following test_fail:

1. library(testthat)

library(RAQSAPI)
Use the function
RAQSAPI::aqs_credentials(username, key)
before using other RAQSAPI functions
See ?RAQSAPI::aqs_credentials for more information

test_check("RAQSAPI")

Attaching package: 'lubridate'

The following objects are masked from 'package:base':

date, intersect, setdiff, union

Saving _problems/test-bybox-31.R
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[ FAIL 73 | WARN 1 | SKIP 0 | PASS 26 ]

══ Warnings ════════════════════════════════════════════════════════════════════
── Warning ('test-AQS_DATAMART_API-S3-class.R:57:5'): test AQS_DATAMART_APIv2_validator ──
expect_no_failure() was deprecated in testthat 3.3.0.
i Please use expect_success() instead.
Backtrace:
▆

1. ├─... %>% expect_no_failure() at test-AQS_DATAMART_API-S3-class.R:57:5
2. └─testthat::expect_no_failure(.)

══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-bybox.R:21:7'): bybox functions ──────────────────────────────
Expected . not to throw any errors.
Actually got a <purrr_error_indexed> with message:
i In index: 1.
Caused by error in basename():
! path too long
Backtrace:
▆

1. ├─... %>% expect_no_error() at test-bybox.R:21:7
2. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:33:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
3. ├─... %>% expect_no_error() at test-bybox.R:33:7
4. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:45:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
5. ├─... %>% expect_no_error() at test-bybox.R:45:7
6. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:57:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
7. ├─... %>% expect_no_error() at test-bybox.R:57:7
8. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:69:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
9. ├─... %>% expect_no_error() at test-bybox.R:69:7
10. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:21:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
11. ├─... %>% expect_no_error() at test-byCBSA.R:21:5
12. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:30:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
13. ├─... %>% expect_no_error() at test-byCBSA.R:30:5
14. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:38:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
15. ├─... %>% expect_no_error() at test-byCBSA.R:38:5
16. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:47:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
17. ├─... %>% expect_no_error() at test-byCBSA.R:47:5
18. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:56:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
19. ├─... %>% expect_no_error() at test-byCBSA.R:56:5
20. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:65:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a with message:
    path too long
    Backtrace:
    ▆
21. ├─... %>% expect_no_error() at test-byCBSA.R:65:5
22. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:21:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
23. ├─... %>% expect_no_error() at test-bycounty.R:21:5
24. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:31:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
25. ├─... %>% expect_no_error() at test-bycounty.R:31:5
26. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:41:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
27. ├─... %>% expect_no_error() at test-bycounty.R:41:5
28. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:51:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
29. ├─... %>% expect_no_error() at test-bycounty.R:51:5
30. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:61:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
31. ├─... %>% expect_no_error() at test-bycounty.R:61:5
32. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:71:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
33. ├─... %>% expect_no_error() at test-bycounty.R:71:5
34. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:81:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
35. ├─... %>% expect_no_error() at test-bycounty.R:81:5
36. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:91:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
37. ├─... %>% expect_no_error() at test-bycounty.R:91:5
38. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:101:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
39. ├─... %>% expect_no_error() at test-bycounty.R:101:5
40. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:111:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
41. ├─... %>% expect_no_error() at test-bycounty.R:111:5
42. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:121:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
43. ├─... %>% expect_no_error() at test-bycounty.R:121:5
44. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:131:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
45. ├─... %>% expect_no_error() at test-bycounty.R:131:5
46. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:141:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
47. ├─... %>% expect_no_error() at test-bycounty.R:141:5
48. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:151:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
49. ├─... %>% expect_no_error() at test-bycounty.R:151:5
50. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:21:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
51. ├─... %>% expect_no_error() at test-byMA.R:21:5
52. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:30:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
53. ├─... %>% expect_no_error() at test-byMA.R:30:5
54. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:39:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
55. ├─... %>% expect_no_error() at test-byMA.R:39:5
56. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:48:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
57. ├─... %>% expect_no_error() at test-byMA.R:48:5
58. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:57:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
59. ├─... %>% expect_no_error() at test-byMA.R:57:5
60. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:66:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
61. ├─... %>% expect_no_error() at test-byMA.R:66:5
62. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:75:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
63. ├─... %>% expect_no_error() at test-byMA.R:75:5
64. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:84:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
65. ├─... %>% expect_no_error() at test-byMA.R:84:5
66. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:93:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
67. ├─... %>% expect_no_error() at test-byMA.R:93:5
68. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:21:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
69. ├─... %>% expect_no_error() at test-bypqao.R:21:5
70. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:30:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
71. ├─... %>% expect_no_error() at test-bypqao.R:30:5
72. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:39:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
73. ├─... %>% expect_no_error() at test-bypqao.R:39:5
74. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:48:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
75. ├─... %>% expect_no_error() at test-bypqao.R:48:5
76. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:57:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
77. ├─... %>% expect_no_error() at test-bypqao.R:57:5
78. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:66:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
79. ├─... %>% expect_no_error() at test-bypqao.R:66:5
80. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:75:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
81. ├─... %>% expect_no_error() at test-bypqao.R:75:5
82. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:84:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
83. ├─... %>% expect_no_error() at test-bypqao.R:84:5
84. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:93:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
85. ├─... %>% expect_no_error() at test-bypqao.R:93:5
86. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:21:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
87. ├─... %>% expect_no_error() at test-bysite.R:21:5
88. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:32:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
89. ├─... %>% expect_no_error() at test-bysite.R:32:5
90. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:43:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
91. ├─... %>% expect_no_error() at test-bysite.R:43:5
92. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:54:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
93. ├─... %>% expect_no_error() at test-bysite.R:54:5
94. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:65:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
95. ├─... %>% expect_no_error() at test-bysite.R:65:5
96. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:76:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
97. ├─... %>% expect_no_error() at test-bysite.R:76:5
98. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:87:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
99. ├─... %>% expect_no_error() at test-bysite.R:87:5
100. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:98:5'): bysite functions ────────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
101. ├─... %>% expect_no_error() at test-bysite.R:98:5
102. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:109:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
103. ├─... %>% expect_no_error() at test-bysite.R:109:5
104. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:120:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
105. ├─... %>% expect_no_error() at test-bysite.R:120:5
106. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:131:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
107. ├─... %>% expect_no_error() at test-bysite.R:131:5
108. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:142:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
109. ├─... %>% expect_no_error() at test-bysite.R:142:5
110. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:153:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
111. ├─... %>% expect_no_error() at test-bysite.R:153:5
112. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:164:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
113. ├─... %>% expect_no_error() at test-bysite.R:164:5
114. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:21:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
115. ├─... %>% expect_no_error() at test-bystate.R:21:5
116. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:30:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
117. ├─... %>% expect_no_error() at test-bystate.R:30:5
118. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:39:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
119. ├─... %>% expect_no_error() at test-bystate.R:39:5
120. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:48:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
121. ├─... %>% expect_no_error() at test-bystate.R:48:5
122. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:57:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
123. ├─... %>% expect_no_error() at test-bystate.R:57:5
124. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:66:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
125. ├─... %>% expect_no_error() at test-bystate.R:66:5
126. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:75:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
127. ├─... %>% expect_no_error() at test-bystate.R:75:5
128. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:84:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
129. ├─... %>% expect_no_error() at test-bystate.R:84:5
130. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:93:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
131. ├─... %>% expect_no_error() at test-bystate.R:93:5
132. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:102:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
133. ├─... %>% expect_no_error() at test-bystate.R:102:5
134. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:111:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
135. ├─... %>% expect_no_error() at test-bystate.R:111:5
136. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:120:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
137. ├─... %>% expect_no_error() at test-bystate.R:120:5
138. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:129:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
139. ├─... %>% expect_no_error() at test-bystate.R:129:5
140. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:138:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
141. ├─... %>% expect_no_error() at test-bystate.R:138:5
142. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:147:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
143. ├─... %>% expect_no_error() at test-bystate.R:147:5
144. └─testthat::expect_no_error(.)
     ── Error ('test-RAQSAPlistfunctions.R:22:5'): list functions ───────────────────
     Error in basename(mp): path too long
     Backtrace:
     ▆
145. ├─aqs_isavailable() %>% dplyr::pull(status) %>% ... at test-RAQSAPlistfunctions.R:22:5
146. ├─testthat::expect_match(...)
147. │ └─testthat::quasi_label(enquo(object), label)
148. │ └─rlang::eval_bare(expr, quo_get_env(quo))
149. ├─dplyr::pull(., status)
150. ├─RAQSAPI::aqs_isavailable()
151. │ ├─... %>% return()
152. │ └─RAQSAPI:::aqs(...)
153. │ └─AQSrequest %>% req_perform(verbosity = 0)
154. └─httr2::req_perform(., verbosity = 0)
155. └─httptest2 (local) mock(req)

156. └─httptest2::find_mock_file(f)
     

157.   ├─base::paste0("^\\Q", basename(mp), "\\E.[[:alnum:]]*$")
     

158.   └─base::basename(mp)
     

[ FAIL 73 | WARN 1 | SKIP 0 | PASS 26 ]
Error:
! Test failures.
Execution halted

R CMD check generated the following check_fails:

1. cyclocomp
2. rcmdcheck_tests_pass

Cyclocomplexity with cyclocomp

The following function have cyclocomplexity >= 15:

function	cyclocomplexity
checkaqsparams	86

---

Package Versions

package	version
pkgstats	0.2.1.7
pkgcheck	0.1.2.257

---

Editor-in-Chief Instructions:

Processing may not proceed until the items marked with ✖️ have been resolved.

[jhollist]

@mccroweyclinton-EPA Thanks for the submission.

go ahead a merge the contributing file into your main branch.

As for the tests, as we discussed (#712) those will need to be finalized and working prior to review, but we can work through that here. @ldecicco-USGS has agreed to take this on as editor. I will assign her shortly.

Any questions, just holler.

[jhollist]

@ropensci-review-bot assign @ldecicco-USGS as editor

[ropensci-review-bot]

Assigned! @ldecicco-USGS is now the editor

[mccroweyclinton-EPA]

contributing.md and CODE_OF_CONDUCT.md have been committed to main.

[mccroweyclinton-EPA]

@ropensci-review-bot check package

[ropensci-review-bot]

I'm sorry @mccroweyclinton-EPA, I'm afraid I can't do that. That's something only editors, author1, author-others and reviewers-list are allowed to do.

[ldecicco-USGS]

@ropensci-review-bot check package

[ropensci-review-bot]

Thanks, about to send the query.

[ropensci-review-bot]

🚀

Editor check started

👋

[ropensci-review-bot]

Checks for RAQSAPI (v2.0.6)

git hash: 19ea57b2

• ✔️ Package is already on CRAN.
• ✔️ has a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✖️ Package fails continuous integration checks.
• ✖️ Package coverage failed
• ✔️ All goodpractice linters passed.
• ✖️ R CMD check found 1 error.
• ✔️ R CMD check found no warnings.
• 👀 Examples should not use \dontrun{} unless really necessary.

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	RAQSAPI	315
internal	base	101
internal	stats	4
internal	utils	1
imports	purrr	206
imports	dplyr	15
imports	tibble	6
imports	tidyselect	6
imports	lubridate	3
imports	glue	2
imports	rlang	2
imports	stringr	2
imports	httr2	1
imports	methods	1
imports	lifecycle	NA
imports	magrittr	NA
suggests	covr	NA
suggests	devtools	NA
suggests	goodpractice	NA
suggests	httptest2	NA
suggests	keyring	NA
suggests	knitr	NA
suggests	markdown	NA
suggests	rmarkdown	NA
suggests	roxygen2	NA
suggests	spelling	NA
suggests	testthat	NA
suggests	usethis	NA
suggests	withr	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

RAQSAPI

aqsmultiyearparams (64), aqs_services_by_county (42), aqs_services_by_site (42), aqs_services_by_state (42), aqs_services_by_MA (27), aqs_services_by_pqao (24), aqs_services_by_cbsa (15), aqs_services_by_box (14), aqs (11), format_multiple_params_for_api (7), aqs_metadata_service (3), aqs_annualsummary_by_box (1), aqs_annualsummary_by_cbsa (1), aqs_annualsummary_by_county (1), aqs_annualsummary_by_site (1), aqs_annualsummary_by_state (1), aqs_cbsas (1), aqs_classes (1), aqs_counties_by_state (1), aqs_credentials (1), aqs_dailysummary_by_box (1), aqs_dailysummary_by_cbsa (1), aqs_dailysummary_by_county (1), aqs_dailysummary_by_site (1), aqs_dailysummary_by_state (1), AQS_DATAMART_APIv2_validator (1), aqs_fields_by_service (1), aqs_isavailable (1), aqs_knownissues (1), aqs_mas (1), aqs_monitors_by_box (1), aqs_monitors_by_cbsa (1), aqs_monitors_by_county (1), aqs_monitors_by_site (1), RAQSAPI_error_msg (1)

purrr

pmap (206)

base

c (35), format (28), list (19), with (4), character (2), class (2), vector (2), I (1), length (1), message (1), names (1), paste (1), return (1), sys.call (1), Sys.getenv (1), sys.parent (1)

dplyr

select (6), between (4), rename (4), bind_rows (1)

tibble

tibble (6)

tidyselect

where (6)

stats

filter (4)

lubridate

NA_Date_ (3)

glue

glue (2)

rlang

abort (1), call_name (1)

stringr

str_c (1), str_detect (1)

httr2

last_response (1)

methods

as (1)

utils

tail (1)

NOTE: Some imported packages appear to have no associated function calls; please ensure with author that these 'Imports' are listed appropriately.

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (99% in 14 files) and YAML (1% in 1 files)
• 1 authors
• 13 vignettes
• no internal data file
• 12 imported packages
• 93 exported functions (median 12 lines of code)
• 141 non-exported functions in R (median 16 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	14	77.1
files_inst	1	89.3
files_vignettes	22	100.0
files_tests	14	94.6
loc_R	1876	87.0
loc_inst	4	8.1
loc_vignettes	1958	97.3	TRUE
loc_tests	933	85.3
num_vignettes	13	99.4	TRUE
n_fns_r	234	93.7
n_fns_r_exported	93	95.5	TRUE
n_fns_r_not_exported	141	92.1
n_fns_per_file_r	9	91.0
num_params_per_fn	7	88.5
loc_per_fn_r	13	58.5
loc_per_fn_r_exp	12	51.2
loc_per_fn_r_not_exp	16	68.3
rel_whitespace_R	20	88.5
rel_whitespace_inst	25	9.3
rel_whitespace_vignettes	14	90.3
rel_whitespace_tests	11	74.9
doclines_per_fn_exp	84	88.7
doclines_per_fn_not_exp	0	0.0	TRUE
doclines_per_fn_src	2	96.2	TRUE
fn_call_network_size	172	89.1

---

2a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

---

3b. goodpractice results

R CMD check with rcmdcheck

R CMD check generated the following error:

1. checking tests ...
   Running ‘spelling.R’
   Comparing ‘spelling.Rout’ to ‘spelling.Rout.save’ ... OK
   Running ‘testthat.R’
   ERROR
   Running the tests in ‘tests/testthat.R’ failed.
   Last 13 lines of output:
   5. ├─dplyr::pull(., status)
   6. ├─RAQSAPI::aqs_isavailable()
   7. │ ├─... %>% return()
   8. │ └─RAQSAPI:::aqs(...)
   9. │ └─AQSrequest %>% req_perform(verbosity = 0)
   10. └─httr2::req_perform(., verbosity = 0)
   11. └─httptest2 (local) mock(req)
   12. └─httptest2::find_mock_file(f)
   13. ├─base::paste0("^\Q", basename(mp), "\E.[[:alnum:]]*$")
   14. └─base::basename(mp)

[ FAIL 73 | WARN 1 | SKIP 0 | PASS 26 ]
Error:
! Test failures.
Execution halted

R CMD check generated the following test_fail:

1. library(testthat)

library(RAQSAPI)
Use the function
RAQSAPI::aqs_credentials(username, key)
before using other RAQSAPI functions
See ?RAQSAPI::aqs_credentials for more information

test_check("RAQSAPI")

Attaching package: 'lubridate'

The following objects are masked from 'package:base':

date, intersect, setdiff, union

Saving _problems/test-bybox-31.R
Saving _problems/test-bybox-43.R
Saving _problems/test-bybox-55.R
Saving _problems/test-bybox-67.R
Saving _problems/test-bybox-79.R
Saving _problems/test-byCBSA-28.R
Saving _problems/test-byCBSA-36.R
Saving _problems/test-byCBSA-45.R
Saving _problems/test-byCBSA-54.R
Saving _problems/test-byCBSA-63.R
Saving _problems/test-byCBSA-66.R
Saving _problems/test-bycounty-29.R
Saving _problems/test-bycounty-39.R
Saving _problems/test-bycounty-49.R
Saving _problems/test-bycounty-59.R
Saving _problems/test-bycounty-69.R
Saving _problems/test-bycounty-79.R
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Saving _problems/test-byMA-28.R
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Saving _problems/test-byMA-82.R
Saving _problems/test-byMA-91.R
Saving _problems/test-byMA-100.R
Saving _problems/test-bypqao-28.R
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Saving _problems/test-bystate-37.R
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Saving _problems/test-bystate-73.R
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Saving _problems/test-bystate-136.R
Saving _problems/test-bystate-145.R
Saving _problems/test-bystate-154.R
Saving _problems/test-RAQSAPlistfunctions-24.R
[ FAIL 73 | WARN 1 | SKIP 0 | PASS 26 ]

══ Warnings ════════════════════════════════════════════════════════════════════
── Warning ('test-AQS_DATAMART_API-S3-class.R:57:5'): test AQS_DATAMART_APIv2_validator ──
expect_no_failure() was deprecated in testthat 3.3.0.
i Please use expect_success() instead.
Backtrace:
▆

1. ├─... %>% expect_no_failure() at test-AQS_DATAMART_API-S3-class.R:57:5
2. └─testthat::expect_no_failure(.)

══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-bybox.R:21:7'): bybox functions ──────────────────────────────
Expected . not to throw any errors.
Actually got a <purrr_error_indexed> with message:
i In index: 1.
Caused by error in basename():
! path too long
Backtrace:
▆

1. ├─... %>% expect_no_error() at test-bybox.R:21:7
2. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:33:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
3. ├─... %>% expect_no_error() at test-bybox.R:33:7
4. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:45:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
5. ├─... %>% expect_no_error() at test-bybox.R:45:7
6. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:57:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
7. ├─... %>% expect_no_error() at test-bybox.R:57:7
8. └─testthat::expect_no_error(.)
   ── Failure ('test-bybox.R:69:7'): bybox functions ──────────────────────────────
   Expected . not to throw any errors.
   Actually got a <purrr_error_indexed> with message:
   i In index: 1.
   Caused by error in basename():
   ! path too long
   Backtrace:
   ▆
9. ├─... %>% expect_no_error() at test-bybox.R:69:7
10. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:21:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
11. ├─... %>% expect_no_error() at test-byCBSA.R:21:5
12. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:30:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
13. ├─... %>% expect_no_error() at test-byCBSA.R:30:5
14. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:38:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
15. ├─... %>% expect_no_error() at test-byCBSA.R:38:5
16. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:47:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
17. ├─... %>% expect_no_error() at test-byCBSA.R:47:5
18. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:56:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
19. ├─... %>% expect_no_error() at test-byCBSA.R:56:5
20. └─testthat::expect_no_error(.)
    ── Failure ('test-byCBSA.R:65:5'): byCBSA functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a with message:
    path too long
    Backtrace:
    ▆
21. ├─... %>% expect_no_error() at test-byCBSA.R:65:5
22. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:21:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
23. ├─... %>% expect_no_error() at test-bycounty.R:21:5
24. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:31:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
25. ├─... %>% expect_no_error() at test-bycounty.R:31:5
26. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:41:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
27. ├─... %>% expect_no_error() at test-bycounty.R:41:5
28. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:51:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
29. ├─... %>% expect_no_error() at test-bycounty.R:51:5
30. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:61:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
31. ├─... %>% expect_no_error() at test-bycounty.R:61:5
32. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:71:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
33. ├─... %>% expect_no_error() at test-bycounty.R:71:5
34. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:81:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
35. ├─... %>% expect_no_error() at test-bycounty.R:81:5
36. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:91:5'): bycounty functions ────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
37. ├─... %>% expect_no_error() at test-bycounty.R:91:5
38. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:101:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
39. ├─... %>% expect_no_error() at test-bycounty.R:101:5
40. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:111:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
41. ├─... %>% expect_no_error() at test-bycounty.R:111:5
42. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:121:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
43. ├─... %>% expect_no_error() at test-bycounty.R:121:5
44. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:131:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
45. ├─... %>% expect_no_error() at test-bycounty.R:131:5
46. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:141:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
47. ├─... %>% expect_no_error() at test-bycounty.R:141:5
48. └─testthat::expect_no_error(.)
    ── Failure ('test-bycounty.R:151:5'): bycounty functions ───────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
49. ├─... %>% expect_no_error() at test-bycounty.R:151:5
50. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:21:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
51. ├─... %>% expect_no_error() at test-byMA.R:21:5
52. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:30:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
53. ├─... %>% expect_no_error() at test-byMA.R:30:5
54. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:39:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
55. ├─... %>% expect_no_error() at test-byMA.R:39:5
56. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:48:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
57. ├─... %>% expect_no_error() at test-byMA.R:48:5
58. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:57:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
59. ├─... %>% expect_no_error() at test-byMA.R:57:5
60. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:66:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
61. ├─... %>% expect_no_error() at test-byMA.R:66:5
62. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:75:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
63. ├─... %>% expect_no_error() at test-byMA.R:75:5
64. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:84:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
65. ├─... %>% expect_no_error() at test-byMA.R:84:5
66. └─testthat::expect_no_error(.)
    ── Failure ('test-byMA.R:93:5'): byMA functions ────────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
67. ├─... %>% expect_no_error() at test-byMA.R:93:5
68. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:21:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
69. ├─... %>% expect_no_error() at test-bypqao.R:21:5
70. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:30:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
71. ├─... %>% expect_no_error() at test-bypqao.R:30:5
72. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:39:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
73. ├─... %>% expect_no_error() at test-bypqao.R:39:5
74. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:48:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
75. ├─... %>% expect_no_error() at test-bypqao.R:48:5
76. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:57:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
77. ├─... %>% expect_no_error() at test-bypqao.R:57:5
78. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:66:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
79. ├─... %>% expect_no_error() at test-bypqao.R:66:5
80. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:75:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
81. ├─... %>% expect_no_error() at test-bypqao.R:75:5
82. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:84:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
83. ├─... %>% expect_no_error() at test-bypqao.R:84:5
84. └─testthat::expect_no_error(.)
    ── Failure ('test-bypqao.R:93:5'): bypqao functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
85. ├─... %>% expect_no_error() at test-bypqao.R:93:5
86. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:21:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
87. ├─... %>% expect_no_error() at test-bysite.R:21:5
88. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:32:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
89. ├─... %>% expect_no_error() at test-bysite.R:32:5
90. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:43:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
91. ├─... %>% expect_no_error() at test-bysite.R:43:5
92. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:54:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
93. ├─... %>% expect_no_error() at test-bysite.R:54:5
94. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:65:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
95. ├─... %>% expect_no_error() at test-bysite.R:65:5
96. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:76:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
97. ├─... %>% expect_no_error() at test-bysite.R:76:5
98. └─testthat::expect_no_error(.)
    ── Failure ('test-bysite.R:87:5'): bysite functions ────────────────────────────
    Expected . not to throw any errors.
    Actually got a <purrr_error_indexed> with message:
    i In index: 1.
    Caused by error in basename():
    ! path too long
    Backtrace:
    ▆
99. ├─... %>% expect_no_error() at test-bysite.R:87:5
100. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:98:5'): bysite functions ────────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
101. ├─... %>% expect_no_error() at test-bysite.R:98:5
102. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:109:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
103. ├─... %>% expect_no_error() at test-bysite.R:109:5
104. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:120:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
105. ├─... %>% expect_no_error() at test-bysite.R:120:5
106. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:131:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
107. ├─... %>% expect_no_error() at test-bysite.R:131:5
108. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:142:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
109. ├─... %>% expect_no_error() at test-bysite.R:142:5
110. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:153:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
111. ├─... %>% expect_no_error() at test-bysite.R:153:5
112. └─testthat::expect_no_error(.)
     ── Failure ('test-bysite.R:164:5'): bysite functions ───────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
113. ├─... %>% expect_no_error() at test-bysite.R:164:5
114. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:21:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
115. ├─... %>% expect_no_error() at test-bystate.R:21:5
116. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:30:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
117. ├─... %>% expect_no_error() at test-bystate.R:30:5
118. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:39:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
119. ├─... %>% expect_no_error() at test-bystate.R:39:5
120. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:48:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
121. ├─... %>% expect_no_error() at test-bystate.R:48:5
122. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:57:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
123. ├─... %>% expect_no_error() at test-bystate.R:57:5
124. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:66:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
125. ├─... %>% expect_no_error() at test-bystate.R:66:5
126. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:75:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
127. ├─... %>% expect_no_error() at test-bystate.R:75:5
128. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:84:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
129. ├─... %>% expect_no_error() at test-bystate.R:84:5
130. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:93:5'): bystate functions ──────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
131. ├─... %>% expect_no_error() at test-bystate.R:93:5
132. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:102:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
133. ├─... %>% expect_no_error() at test-bystate.R:102:5
134. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:111:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
135. ├─... %>% expect_no_error() at test-bystate.R:111:5
136. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:120:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
137. ├─... %>% expect_no_error() at test-bystate.R:120:5
138. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:129:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
139. ├─... %>% expect_no_error() at test-bystate.R:129:5
140. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:138:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
141. ├─... %>% expect_no_error() at test-bystate.R:138:5
142. └─testthat::expect_no_error(.)
     ── Failure ('test-bystate.R:147:5'): bystate functions ─────────────────────────
     Expected . not to throw any errors.
     Actually got a <purrr_error_indexed> with message:
     i In index: 1.
     Caused by error in basename():
     ! path too long
     Backtrace:
     ▆
143. ├─... %>% expect_no_error() at test-bystate.R:147:5
144. └─testthat::expect_no_error(.)
     ── Error ('test-RAQSAPlistfunctions.R:22:5'): list functions ───────────────────
     Error in basename(mp): path too long
     Backtrace:
     ▆
145. ├─aqs_isavailable() %>% dplyr::pull(status) %>% ... at test-RAQSAPlistfunctions.R:22:5
146. ├─testthat::expect_match(...)
147. │ └─testthat::quasi_label(enquo(object), label)
148. │ └─rlang::eval_bare(expr, quo_get_env(quo))
149. ├─dplyr::pull(., status)
150. ├─RAQSAPI::aqs_isavailable()
151. │ ├─... %>% return()
152. │ └─RAQSAPI:::aqs(...)
153. │ └─AQSrequest %>% req_perform(verbosity = 0)
154. └─httr2::req_perform(., verbosity = 0)
155. └─httptest2 (local) mock(req)

156. └─httptest2::find_mock_file(f)
     

157.   ├─base::paste0("^\\Q", basename(mp), "\\E.[[:alnum:]]*$")
     

158.   └─base::basename(mp)
     

[ FAIL 73 | WARN 1 | SKIP 0 | PASS 26 ]
Error:
! Test failures.
Execution halted

R CMD check generated the following check_fails:

1. cyclocomp
2. rcmdcheck_tests_pass

Cyclocomplexity with cyclocomp

The following function have cyclocomplexity >= 15:

function	cyclocomplexity
checkaqsparams	86

---

Package Versions

package	version
pkgstats	0.2.1.8
pkgcheck	0.1.2.257

---

Editor-in-Chief Instructions:

Processing may not proceed until the items marked with ✖️ have been resolved.