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Generalised Jeffery's equations for rapidly spinning particles. Part 2. Helicoidal objects with chirality

Published online by Cambridge University Press:  09 January 2024

M.P. Dalwadi*
Affiliation:
Department of Mathematics, University College London, London WC1H 0AY, UK Mathematical Institute, University of Oxford, Oxford OX2 6GG, UK
C. Moreau
Affiliation:
Research Institute for Mathematical Sciences, Kyoto University, Kyoto 606-8502, Japan
E.A. Gaffney
Affiliation:
Wolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxford OX2 6GG, UK
B.J. Walker
Affiliation:
Department of Mathematics, University College London, London WC1H 0AY, UK Department of Mathematical Sciences, University of Bath, Bath BA2 7AY, UK
K. Ishimoto
Affiliation:
Research Institute for Mathematical Sciences, Kyoto University, Kyoto 606-8502, Japan
*
Email address for correspondence: m.dalwadi@ucl.ac.uk

Abstract

Image

In this two-part study, we investigate the motion of rigid, active objects in shear Stokes flow, focusing on bodies that induce rapid rotation as part of their activity. In Part 2, we derive and analyse governing equations for rapidly spinning complex-shaped particles – general helicoidal objects with chirality. Using the multiscale framework that we develop in Part 1 (Dalwadi et al., J. Fluid Mech., vol. 979, 2024, A1), we systematically derive emergent equations of motion for the angular and translational dynamics of these chiral spinning objects. We show that the emergent dynamics due to rapid rotation can be described by effective generalised Jeffery's equations, which differ from the classic versions via the inclusion of additional terms that account for chirality and other asymmetries. Furthermore, we use our analytic results to characterise and quantify the explicit effect of rotation on the effective hydrodynamic shape of the chiral objects, expanding significantly the scope of Jeffery's seminal study.

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Type
JFM Papers
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2024. Published by Cambridge University Press.
Figure 0

Figure 1. A schematic of the notation and the physical set-up that we consider in Part 2. We investigate the dynamics of a chiral, helicoidal swimmer with axis of symmetry Image$\hat {\boldsymbol {e}}_{1}$. The swimmer has self-generated translational and rotational velocities Image$\boldsymbol {V} = V_1\hat {\boldsymbol {e}}_{1} + V_2\hat {\boldsymbol {e}}_{2} + V_3\hat {\boldsymbol {e}}_{3}$ and Image$\boldsymbol {\varOmega } = \varOmega _{\parallel }\hat {\boldsymbol {e}}_{1} + \varOmega _{\perp }\hat {\boldsymbol {e}}_{2}$, respectively, and these interact with a background shear flow Image$\boldsymbol {u} = y \boldsymbol {e}_{3}$.

Figure 1

Table 1. Summary of the six parameters that characterise objects with hydrodynamic helicoidal symmetry.

Figure 2

Figure 2. Examples of the class of shapes considered in Part 2. (a) The bodies that we investigate possess ‘helicoidal’ symmetry, which allows us to characterise their dynamics in shear flow with six parameters, Image$B,C,D,\beta,\gamma,\delta$. (b) We distinguish the specific subcases that we discuss in the main text: homochirality, heterochirality, achirality and Jeffery bodies, with this last class of objects following the simpler dynamics investigated in Part 1. Each category of shape is illustrated with an example particle possessing additional geometrical symmetries. (c) For comparison, we provide an example of a shape that does not possess helicoidal symmetry and therefore is not captured by our analysis.

Figure 3

Figure 3. The effective parameters Image$\hat {B}, \hat {C}, \hat {D}, \hat {\beta }, \hat {\gamma }, \hat {\delta }$ as functions of Image$\omega$, normalised by their intrinsic equivalents. (a) Image$\hat {B}$ and Image$\hat {\beta }$ are functions only of Image$\omega$, and exhibit the same dependence on Image$\omega$ following normalisation. (b,c) The remaining effective parameters are functions of three parameters. All are coupled to Image$\omega$; the orientational shape parameters are also coupled to Image$C$ and Image$D$, while the translational shape parameters are also coupled to Image$\gamma$ and Image$\delta$ instead. We show selected curves for different parameter values. Several of the effective coefficients display non-trivial zeros as functions of Image$\omega$. This suggests that specific activity-induced spinning can effectively eliminate certain parameters, and hence the associated physical interactions of an object with the flow.

Figure 4

Figure 4. Exploring the orientational dynamics in the Image$(\phi,\theta )$-plane for various values of Image$B$, Image$C$ and Image$\omega$, with sample, rapidly oscillating full dynamics shown in blue for Image$\omega \neq 0$, and the corresponding averaged dynamics shown in red: (a) Image$(B,C) = (0.7,0)$, (b) Image$(B,C) = (0.7,0.7)$, (c) Image$(B,C) = (0.7,1.5)$, (d) Image$(B,C) = (0,0.7)$, and (e) Image$(B,C) = (0,1.5)$. We use Image$D=0$ and Image$(\theta,\phi ) = ({\rm \pi} /2,-{\rm \pi} )$ at initial time throughout. For the blue lines, we also set Image$\varOmega _{\parallel } = 10$ and Image$\varOmega _{\perp } = 10 \omega$. Dynamic versions of the full dynamics of the highlighted trajectories in (be) are given in supplementary movies 1–4.

Figure 5

Figure 5. Schematic showing the qualitative nature of the orientational dynamics within the parameter space Image$(B,C)$, for different values of Image$\omega$. The darker regions within each ellipse indicate that trajectories drift towards a pole (Image$\theta = 0$ for the yellow region, Image$\theta = {\rm \pi}$ for the blue region). Outside the ellipses, the pole solutions become repulsive points and non-trivial attractors exist. The lighter regions external to each ellipse indicate that these non-trivial attractors are in the northern (yellow) and southern (blue) hemispheres, respectively. The thicker red lines (solid and dashed) on the axes indicate periodic trajectories. Dashed lines indicate the existence of orbits that are not centred around one of the poles at Image$\theta = 0, {\rm \pi}$. In the critical cases Image$\omega = \sqrt {2}$ and Image$\omega \to \infty$, all trajectories are orbits, so there exist only red regions. There is a distinction between orbits centred around a pole (darker red) and not centred around a pole (lighter red). Finally, the influence of the third shape parameter Image$D$ is shown: (a) Image$D=0$, (b) Image$D=0.3$, and (c) Image$D=-0.3$.

Figure 6

Figure 6. Representations of the scaled effective chiral coefficients: (a) Image$\hat {C}/ \sqrt {C^2 + D^2} \in [-1, 1]$, (b) Image$\hat {D}/ \sqrt {C^2 + D^2} \in [-1, 1]$, (c) Image$\sqrt {(\hat {C}^2 + \hat {D}^2)/(C^2 + D^2)} \in [0, 1]$. We define these quantities in (4.14a,b) and (4.17). Notably, the magnitude of each quantity is bounded above by 1, so we may conclude that the effect of rapid rotation is to reduce the effective overall chirality of an object.

Figure 7

Figure 7. Illustration of the agreement between the full spinning translational dynamics and the emergent system that we derive. (a) The predictions of the emergent dynamics are shown as a red curve, while the full dynamics is shown as a black line with attached ribbon, coloured according to the spin angle Image$\psi$ of the object. Differences between the dynamics are barely visible at the resolution of this plot. (b) A portion of the trajectory in (a), showing the small (expected) discrepancy between the full and emergent solutions. Here, we have taken Image$\varOmega _{\parallel } = \varOmega _{\perp } = 100$, Image$B=0.8$, Image$C=-0.3$, Image$D=-0.5$, Image$\beta =0.01$, Image$\gamma = 0.3$, Image$\delta = -3$, Image$V_1 = 1$ and Image$V_2 = V_3 = 0.5$.

Figure 8

Figure 8. Exploring the influence of the effective geometric parameters Image$\hat {\beta }$, Image$\hat {\gamma }$, Image$\hat {\delta }$ and Image$\hat {C}$ on the emergent translational dynamics. In each panel, we vary each effective parameter independently from Image$(\hat {\beta }, \hat {\gamma }, \hat {\delta }, \hat {C}) = (0,0,0,0)$, highlighting the distinct role that each parameter plays in determining the emergent translational dynamics. In each column, we show three-dimensional trajectories and traces of laboratory-frame coordinates over time. Throughout, we use initial conditions Image$\boldsymbol {X} = 0$ and Image$(\theta,\phi,\psi ) = ({\rm \pi} /3,{\rm \pi} /6,2{\rm \pi} /3)$.

Figure 9

Figure 9. (a) Schematic of a model bacterium with a spheroidal cell body and a helical flagellum. The cell body is a rigid spheroid with semi-axes Image$c$, Image$a$, Image$a$, and the flagellum is a simple circular rigid helix with pitch Image$\lambda$, amplitude Image$b$ and length Image$L$. The axis of the helix is Image$\hat {\boldsymbol {e}}_{1}$, the director vector of the swimmer. (bg) The values of shape parameters, Image$B$, Image$C$, Image$D$, Image$\beta$, Image$\gamma$, Image$\delta$ for the model bacterium described in (a). These parameters are calculated from resistive force theory, using different cell body aspect ratios Image$c/a\in \{0.25, 0.5, 0.75, 1, 1.5, 2, 2.5, 3 \}$ and flagellar lengths Image$L$. The horizontal axis represents the effective aspect ratio Image$\tilde {c}$, obtained from the values of Image$B$. The remaining parameters are the same as those used in Ishimoto (2020a), and Image$a=1$, Image$\lambda =2.5$ and Image$b = 0.25$. The lines represent different values of Image$c$. On each line, we use the symbols described in each legend to plot the values corresponding to Image$L=0,2, 4, 6, 8, 10$.

Supplementary material: File

Dalwadi et al. supplementary movie 1

Animated dynamics of Figure 4b, with (B, C) = (0.7,0). The shapes of the particles are for illustrative purposes, and only qualitatively match the parameter values.
Download Dalwadi et al. supplementary movie 1(File)
File 8.8 MB
Supplementary material: File

Dalwadi et al. supplementary movie 2

Animated dynamics of Figure 4c, with (B, C) = (0.7, 1.5). The shapes of the particles are for illustrative purposes, and only qualitatively match the parameter values.
Download Dalwadi et al. supplementary movie 2(File)
File 7.5 MB
Supplementary material: File

Dalwadi et al. supplementary movie 3

Animated dynamics of Figure 4d, with (B, C) = (0, 0.7). The shapes of the particles are for illustrative purposes, and only qualitatively match the parameter values.
Download Dalwadi et al. supplementary movie 3(File)
File 8.8 MB
Supplementary material: File

Dalwadi et al. supplementary movie 4

Animated dynamics of Figure 4e, with (B, C) = (0, 1.5). The shapes of the particles are for illustrative purposes, and only qualitatively match the parameter values.
Download Dalwadi et al. supplementary movie 4(File)
File 9.2 MB
Supplementary material: File

Dalwadi et al. supplementary movie 5

Video summarising the different dynamics explored in the paper. The shapes of the particles are for illustrative purposes, and only qualitatively match the parameter values. Throughout the movie, we use B = 0.7. For each simulation, we use the initial conditions X = 0 and (θ,ψ,φ) = (π/4,π/2,π/4). Additional parameter values are given below. First part: (C, D, β, γ, δ) = (0, 0, 0, 0, 0). Second part: (C, D, β, γ, δ) = (0, 0, 0, 0.5, 1). Third, fourth and fifth part: $(C, D, β, γ, δ) = (-0.5, 1, 0.1, 0.5, 1). First, second and third part: Ω∥ = 0, Ω⊥ = 0 (no spinning). Fourth part: Ω∥ = 20, Ω⊥ = 4. Fifth part: Ω∥ = 20, Ω⊥ = 20.
Download Dalwadi et al. supplementary movie 5(File)
File 3.6 MB