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Our 10th Single Cell Genomics Day is next Friday (6/12)!
Thanks to amazing speakers Aviv Regev @xinjin @anshulkundaje @junyue_cao and many more! Talks are live-streamed on YouTube and are free (no registration required) at satijalab.org/scgd
Rahul Satija
949 posts
Rahul Satija
@satijalab
Core Member, New York Genome Center; Professor, Biology, NYU
Joined September 2009
- Interested in single cell genomics but need help getting started? Check out the full agenda for our Single Cell Genomics Day next Friday (3/4). All talks will be live-streamed (no registration required) at satijalab.org/scgd22
- Interested in single cell genomics but need help getting started? Check out my lab's Single Cell Genomics Day on March 26. Talks will feature recent exciting computational and experimental advances and will be livestreamed at satijalab.org/scgd. Please RT/spread the word!
- We are excited to release Seurat v5- with new methods for multimodal, spatially resolved, and massively scalable single-cell analysis. satijalab.org/seurat
- Interested in single cell genomics but need help getting started? Check out my lab's Single Cell Genomics Day on March 4. Talks will feature recent exciting computational and experimental advances and will be livestreamed at satijalab.org/scgd. Please RT/spread the word!
- As my lab develops Seurat, I wanted to share some thoughts on the important Seurat and scanpy package selection preprint from @Josephmrich/@lpachter 🧵
- Seurat v4 is now available on CRAN! V4 includes tools for single-cell analysis of multimodal, spatial, and pooled CRISPR screen datasets. We also have an updated website with new vignettes, improved docs, and tips for analyzing and integrating many cells: satijalab.org/seurat
- Interested in single cell genomics but need help getting started? Check out the full agenda for our Single Cell Genomics Day next Friday (4/7). All talks will be live-streamed (no registration required) at satijalab.org/scgd23
- We've released a Seurat update with support for imaging-based spatial technologies! Our new vignette shows how to download, analyze, and explore public datasets from @vizgen_inc (MERFISH), @nanostringtech (SMI), and @AkoyaBio (CODEX). Check it out at: satijalab.org/seurat/article…
- Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out the full agenda for our Single Cell Genomics Day on Friday, 3/29. All talks will be live-streamed (no registration required) at satijalab.org/scgd
- Interested in single cell genomics but need help getting started? Check out the full agenda for our Single Cell Genomics Day next Friday (3/26). All talks will be live-streamed (no registration required) at satijalab.org/scgd21/
- We've been working on Seurat v4 for almost two years, and are excited to share it with you soon! In a webinar w/@10xGenomics on 10/20, I'll introduce new methods to analyze multimodal single-cell data (i.e. from CITE-seq or the 10x multiome ATAC+RNA kit): 10xgenomics.com/event/integrat…
- Our paper describing Weighted Nearest Neighbor analysis in Seurat v4 is out in @CellCellPress! We introduce a framework to analyze and integrate datasets where multiple data types are simultaneously collected in the same cell:
