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Chaitanya K. Joshi
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Chaitanya K. Joshi

@chaitjo
AI for biology 🧬 Postdoc at Stanford @RDasLab PhD @Cambridge_Uni · prev @AIatMeta @PrescientDesign @MRC_LMB
Palo Alto, CA
chaitjo.com
Joined July 2010
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  • Pinned
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    Chaitanya K. Joshi
    @chaitjo
    Jan 8
    Article cover image
    Article
    A Cambridge PhD thesis in three research questions
    Happy new year 2026! I’ve officially passed my PhD thesis defence! Writing the thesis was a meditative and reflective period; a culmination of almost 4 years of research. As I look back, I feel...
  • user avatar
    Chaitanya K. Joshi
    @chaitjo
    Aug 12
    Feel kind of sad. Obviously it was said that as soon as benchmarks go public the labs train on the test set or RL on them. But this reminds me of school, rote learning for doing well in exams, etc.
    user avatar
    Alexander Panfilov
    @kotekjedi_ml
    Aug 11
    Replying to @kotekjedi_ml
    But we also took a chance to have a look at some in-the-wild scheming, reward seeking, etc. examples, and dumped it in appendix. 1) Summarizer unfaithfulness Reasoning summaries often omit important information from the original trace. Here, Opus 4.8 realizes it knows the
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    Chaitanya K. Joshi
    @chaitjo
    Aug 10
    Sometimes in academia ppl will say stuff like chai, protenix, boltz, openfold, rf3, etc. are all AF3 'clones' with an undertone around novelty, etc. I think this is such a wrong way to look at it, these models are all foundations for real products now and also importantly the
    user avatar
    Sachin and Adam
    @Sachin_and_Adam
    Aug 9
    "it's compounding returns. every week making 5 to 10% improvements - stack those together for a long time and you end up in a very different place than where you started.” -@joshim5
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    00:00
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    Chaitanya K. Joshi
    @chaitjo
    Aug 9
    Maybe the ribosomal proteins are like the harness around the ribosomal RNA which is the intelligence
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    Richard She
    @Richard_She
    Aug 9
    The ribosome is an RNA you absolute moron
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    Chaitanya K. Joshi
    @chaitjo
    Aug 4
    Image
    The dark horse of biology: how RNA is becoming a nanotool maker’s dream
    From nature.com

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